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13_1_40cm_3_scaffold_4632_10

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(7997..8311)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 102.0
  • Bit_score: 170
  • Evalue 1.30e-39
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 104.0
  • Bit_score: 189
  • Evalue 2.80e-45
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 96.0
  • Bit_score: 170
  • Evalue 2.70e-40

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 315
ATGACGAAGGCCGATCTGGTCGAAAAGGTCACCGCGCAAATCGCTCGAACCGCCGGTCCCCTCATTTCAAAAAAGGACTGTGCGCGGGTGGTAGACTCCTTTCTCGACGCCGTAAAAGCCGCGCTTGCTGAGCAGCATAACATTGAGATACGTGGATTTGGGACGTTCAAAATCCGCCAGCGGAAGACGCGGATGGCGCGTAACCCGAGAACCGGTGATCCGGTCGAAGTCGCGGCGCGCCCCGTTCCTGTCTTCAAGCCCAGCAAGGAGTTGCGCGCGATGGTCGCGGACGCCAGCGCAAAGGTTCCGTCGTAA
PROTEIN sequence
Length: 105
MTKADLVEKVTAQIARTAGPLISKKDCARVVDSFLDAVKAALAEQHNIEIRGFGTFKIRQRKTRMARNPRTGDPVEVAARPVPVFKPSKELRAMVADASAKVPS*