ggKbase home page

13_1_40cm_3_scaffold_4632_23

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(20693..20908)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase omega subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A920_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 68.0
  • Bit_score: 80
  • Evalue 9.10e-13
rpoZ; putative RNA polymerase omega subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 69.0
  • Bit_score: 101
  • Evalue 6.90e-19
rpoZ; putative RNA polymerase omega subunit similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 68.0
  • Bit_score: 80
  • Evalue 2.50e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 216
ATGCGGATCGTGACACCAGCAGAAGTCGCAGGACAGACCCAGAACAAGTACCTCGGCGTCCTCGTGGCGGCCAAGTTCGCGCGCTTCGTCAACGATTTCCCGCGCGACCGGTCGGTCGACTGGGAAGAGAAGCTCACCACGCGGGCATTCGACGAGCTCGTCCGCGGCGGCCTGAAGTACCGCCTGGTGCGGCGGCGGCGCCAGCAGGAAGCCTGA
PROTEIN sequence
Length: 72
MRIVTPAEVAGQTQNKYLGVLVAAKFARFVNDFPRDRSVDWEEKLTTRAFDELVRGGLKYRLVRRRRQQEA*