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13_1_40cm_3_scaffold_4990_8

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(7261..7812)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 184.0
  • Bit_score: 150
  • Evalue 1.80e-33
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 181.0
  • Bit_score: 198
  • Evalue 8.20e-48
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 184.0
  • Bit_score: 150
  • Evalue 5.10e-34

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCGCACCCTCTGCCGCTATCCGAGACATCCAGCGACGCCGCGCTGATACTCGCGTGGCAATCGGGAGATGAACAGGCGGCGGCCGAGCTCGTCGGGCGCCACGCCCGGCCTCTGGCGCGTTTTCTCGCCGGGGCGGGAGCGCCCGAAGCGGACGTGGACGATCTGGTGCAGGAGACGTTCATCCGCGCGTTTCGCAGCGTGGACCGGTTCCGCGGGCAATGCCAGTTTCGCACCTGGCTGCTGACGATCGGCGGCAACGTGCTGAAGGATTTCGGGCGCCGCGCGGCGCGACGCAAAGTGATGCCGTTGGATGAGGCCGTGCGCGATGTCACCGGTGACCCGCACGAACATGCCGAGGCGAGCGAAGCGGAAGAGTTGCTCGCGGCGGGATTGCAGAAGTTGCCAAGGCTGCAGCGGGAAGTGTTCCTGCTGCGGGCACAGCAAGGACTCGAGTACGACGAGATCGCGGCGGCGTTACACACGACGCCGGGGGCAGCGAGAGTGCATTACCATCACGCAGTGCGGAAGCTGAAGGAGATCGTTGAATGA
PROTEIN sequence
Length: 184
MAHPLPLSETSSDAALILAWQSGDEQAAAELVGRHARPLARFLAGAGAPEADVDDLVQETFIRAFRSVDRFRGQCQFRTWLLTIGGNVLKDFGRRAARRKVMPLDEAVRDVTGDPHEHAEASEAEELLAAGLQKLPRLQREVFLLRAQQGLEYDEIAAALHTTPGAARVHYHHAVRKLKEIVE*