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13_1_40cm_3_scaffold_826_25

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: 21754..22689

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 320.0
  • Bit_score: 432
  • Evalue 3.10e-118
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 320.0
  • Bit_score: 432
  • Evalue 8.80e-119
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADU36466.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax. similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 320.0
  • Bit_score: 432
  • Evalue 4.40e-118

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGGCGGAGGAGACTCCCGACATAGAGAACTACGACGTCGTGGATGACCGGCTGCGTCTCATCTTCACCTGCTGTCACCCCGCGTTGAATCCCGACGCACAAGTCGCCATGACGCTGCGCGAAATCTGCGGGCTCACCACCGAGCAAGTCGCGGCGGCGTTCCTCACTACCGCGCCGACGCTGGCGCAGCGGATCGTCCGCGCCAAGACCAAGATTCGCGACGCCCGGATTCCCTACGAGGTGCCCGAGCGCGCCGACCTCCCCGAGCGGCTCGCCAGCGTCCTGCACGTCGTCTACCTGGTCTTCAATCAGGGCTACTTCACCCGTGCCGATCTCGCGACCGAGGCGATCCGCCTGGGGCGGCTGCTCGTAGACCTGCTGCCCGAGTCGGAGGCACTCGGATTGCTCGCTCTGATGCTGCTGCACGACGCGCGACGCGCCACCCGCACGACCGCCGCGGGCGTCCTGATTCCGCTCGAAGAGCAGGACCGCTCGCGGTGGAACAGGGCGCAGATAGAGGAAGGGGCGGCGCTGGTGCGACGTGCGTTCGAAACGCGCCGCGCGGGTCCGTACGCCCTCCAAGCCGCCATCGCGGCGGTGCACGCCGAAGCCCCGTCCTCCGCCGCGACCGACTGGAGCGAGATCGTGGGACTGTACGACGTGCTGTTGAGAATGGAGCCGTCGCCCGTGATCGAGCTCAACCGCGCGGCCGCAGTCGCCATGCGCGATGGCCCGGAGCACGGTCTCACCCTGATCGACGCGATTCTCGCCCGCGGCGAGCTGCAGGAATATCACCTCGCGCACGCCGCGCGCGCGGATCTGTTCCGGCGACTTGGCCGTAAGAGCGAGGCCGCCGCGGCCTACAACCGGGCGCTGGCATTGGCGGTTGAAGAGCCGGAGCGACACCTGCTCGAGCGAAGACTGAAAGAGTTGTGA
PROTEIN sequence
Length: 312
MAEETPDIENYDVVDDRLRLIFTCCHPALNPDAQVAMTLREICGLTTEQVAAAFLTTAPTLAQRIVRAKTKIRDARIPYEVPERADLPERLASVLHVVYLVFNQGYFTRADLATEAIRLGRLLVDLLPESEALGLLALMLLHDARRATRTTAAGVLIPLEEQDRSRWNRAQIEEGAALVRRAFETRRAGPYALQAAIAAVHAEAPSSAATDWSEIVGLYDVLLRMEPSPVIELNRAAAVAMRDGPEHGLTLIDAILARGELQEYHLAHAARADLFRRLGRKSEAAAAYNRALALAVEEPERHLLERRLKEL*