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13_1_40cm_3_scaffold_5182_17

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: comp(11318..12895)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 563.0
  • Bit_score: 462
  • Evalue 4.70e-127
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 567.0
  • Bit_score: 572
  • Evalue 6.00e-160
SecD export membrane protein similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 567.0
  • Bit_score: 486
  • Evalue 1.10e-134

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1578
ATGGACAAGCGAATTCGTGGTCGGCTCTGGGTGATCGGCGCGCTGATAGTCGTGAGCATCATTTCGCTCGTGCCGCGCAACACCAAGCAGCGCGTAATCGACCCGTCGACCGGGCGGCTCAAAGACACGACCGTGCGGCGCTTGCCGATCAACCTCGGCCTCGACCTCCAGGGCGGCATTCACCTGGCGCTCGAAGTCGATCAGTCGAAGGGGCCCGTACCCGATTGCGCCGGCACGACCGAGCCCGTCGTCCAGATTCAGGGCCGCTGCCGGTTGATCGTGGAGCTCGCGGGAGAAAAGGATCCGGGCCGCGCCAAGGGCGTCATTCAGCGGACCGCCTTCCTCGAATTCCGGATCACCGACATGAAGAGTCAGTTCAAGGACGCGTTGCCGCAGATCGACGCCGCGCTGCGGAAGGCGGGGATCAAGTCACGGAACGCCGCGCCGTCGGCCGTGGCGCAGCTGTTCGGCGGCGACACGGGCAAGTCGAAGTCGAAACGCGACACGACGAGCGACGCCAACGCCCCCGGTGTGCTGTCGTCGCTGCTATTCCAGGGTCAGCTGCCGGGGGAATTCCTCGTTCCCGAGGAGCAATGGCCGCTCGTCGACAGTCTCATTCAGCGGCCCGACGTCAGGGCACAGATCCCGCGCAGCATCGAGCTGCGCTGGGGCGCGCAAGCCGAATCGCGCAGCGCGCGGTCCTATCGTCCCCTGTATGCCGTGGAATCGCGGCCCATCATCACCGGCGAAGAGCTGACCAAAGCGGTGGCCCGCCGAGATCAAGTCACCAATCAGTCGATCGTCACATTCCAGCTCAGCCGCCGCGGCGCTCGCATCTTCTCGCAGGAAACGGGACGCCATATCAACGACTTCATGGCGATCATTCTCGACGGCCGCGTGCAGGGAGAGCCGCCGGTCATTAAGAACCAGATCGGGGCGAACGGCCAGATCGAGCTCGGCAGCAAGCCGCTCCAGGAAGCGAGTGATTTGGCGCTCGTGCTGCGGGCCGGAGCCTTGCCCGCGCCCCTCACGATCGTCGACGAGCGCGCGATCAGCGCAAGCCTGGGTGCCGATTCCATCCACGACGGGGTGCTCGCGGGGGTCGTCGGTGTGCTGCTCGTGATCGTGATCATGATCGGTTACTACCGGATAGCGGGCGCGCTCGCGGTCGCGGCACTCACGCTCTACTGCTTGTTCACGCTCGCCGGACTTGCCGCATTCGGCTTCACACTCACGCTGCCGGGCATGGCCGGTTTCGTGTTGTCCATCGGCATCGCCGTGGATGCCAACGTGCTGATCTTCGAGCGCATCCGGGAGGAGCTGGTGCACGGCAAGTCGCTGCGGCTCGCCGTGGATGAGGGCTTTCTGCACGCGATGAACGCCATCGTCGACTCGAACGTGAGTACCATTCTGACCGCGCTGATTCTCTACGCCGTCGGCACCGGCCCGGTGCAGGGCTTTGCCATCACGCTGATCATCGGAATCATCGCCTCGATGGTCTCGGCGATCTTTGTCGTGAAGACATTGTTCCTCATATGGCTGAACCGGCGACCAAACATGGTCACCCTGAGCATCTGA
PROTEIN sequence
Length: 526
MDKRIRGRLWVIGALIVVSIISLVPRNTKQRVIDPSTGRLKDTTVRRLPINLGLDLQGGIHLALEVDQSKGPVPDCAGTTEPVVQIQGRCRLIVELAGEKDPGRAKGVIQRTAFLEFRITDMKSQFKDALPQIDAALRKAGIKSRNAAPSAVAQLFGGDTGKSKSKRDTTSDANAPGVLSSLLFQGQLPGEFLVPEEQWPLVDSLIQRPDVRAQIPRSIELRWGAQAESRSARSYRPLYAVESRPIITGEELTKAVARRDQVTNQSIVTFQLSRRGARIFSQETGRHINDFMAIILDGRVQGEPPVIKNQIGANGQIELGSKPLQEASDLALVLRAGALPAPLTIVDERAISASLGADSIHDGVLAGVVGVLLVIVIMIGYYRIAGALAVAALTLYCLFTLAGLAAFGFTLTLPGMAGFVLSIGIAVDANVLIFERIREELVHGKSLRLAVDEGFLHAMNAIVDSNVSTILTALILYAVGTGPVQGFAITLIIGIIASMVSAIFVVKTLFLIWLNRRPNMVTLSI*