ggKbase home page

13_1_40cm_3_scaffold_135_4

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(3879..4115)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECF_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 79.0
  • Bit_score: 75
  • Evalue 3.20e-11
secF; protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 85.0
  • Bit_score: 87
  • Evalue 6.60e-15
SecF protein similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 73.0
  • Bit_score: 83
  • Evalue 3.30e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 237
ATGGCCACGACGCTGGCCCTGGTGTTCCTCGCCGGCGAGGTGATCCGGCCGTTCGCCCTGGTGATGACGTTCGGCATCTTCACGGGCACCTTCTCGTCGATCTACATCGCGGCGCCGGTGCTGATGCTCATCGAGAAGCGGTGGCCGGGGCAGGACGCGCGCGGTGCCCGGGCCTTCACCGGACGCGCCCCGGAGCCGGCGGCGCCGGCGGTCCCGCGGGCGCCGGCCAAGGTGTGA
PROTEIN sequence
Length: 79
MATTLALVFLAGEVIRPFALVMTFGIFTGTFSSIYIAAPVLMLIEKRWPGQDARGARAFTGRAPEPAAPAVPRAPAKV*