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13_1_40cm_3_scaffold_135_8

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(7376..8215)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12555519 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 294.0
  • Bit_score: 224
  • Evalue 1.50e-55
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 291.0
  • Bit_score: 221
  • Evalue 2.80e-55
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthas similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 291.0
  • Bit_score: 221
  • Evalue 1.40e-54

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Taxonomy

Thermobifida fusca → Thermobifida → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGGCCCTGGTCGCGAAGCCGGCGGGCCCGACCTCGCACGACGTCGTGGATCTCGTGCGACGCGTCCTCGGCACCAGGCGGGTCGGGCACCTGGGGACGCTCGACCCGTTCGCCGCCGGCCTGCTGGTGGTGGTCGTGGGGCGCGCGACGCGCTTAGCCCCCTACGCCGCCGGCTGGGACAAGGCCTACGAGGGCGTGATCCGGCTCGGTGCGCGCACCGCGACCGACGACCCCACCGGCGCCGTGGTGGAGACGTCGGACGTCTGGCGATCCCTCGACCGCGACGCCGTGGCGGCGGCACTGGGGCGGTTTCGCGGCACGGTGCGGCAGCGGCCGCCGGATCATTCGGCGGTGAAGGTGCAGGGGGAGCGCGCCTACCGGCGCGCCCGCCGTGGCGAACCCGTGGAGCTGCCGGAGCGCGAAGTGGAATTCCGCGAGCTGGAGCTGGTCGCGTTCGAGCCGCCGGATGCCCGATTCCGCGCCGTCGTGAGCGGCGGCACGTACCTGCGGAGCCTGGCCCGCGACGTCGGTGAGGCCCTCGGGTGCGGCGCCCACCTCGCGATGCTGCAGCGGACCCGCGTGGGCCCGTTCCGCGTCGAGGAGGCCGTGGCGCCCCAGGCGGTGACGGTCGCTGGGCTCGTGGACGAGGCGGCGCTCGTCGCCGACCTGCCGCGGCGGGAGCTCGACGAGGCGGGGCGCGTGGCGGCGCTGCACGGTCGACCGGTGCCGGCAGGGAAGGGGGAAGAGGGAAGGGTGGCCCTGTTCGCCGGCGGGCACCTCATCGCCGTAGCCGAGCGGGTCGGCGAGCTGCTCAAGCCGCGCGTGGTGGTGGCGGAATGA
PROTEIN sequence
Length: 280
VALVAKPAGPTSHDVVDLVRRVLGTRRVGHLGTLDPFAAGLLVVVVGRATRLAPYAAGWDKAYEGVIRLGARTATDDPTGAVVETSDVWRSLDRDAVAAALGRFRGTVRQRPPDHSAVKVQGERAYRRARRGEPVELPEREVEFRELELVAFEPPDARFRAVVSGGTYLRSLARDVGEALGCGAHLAMLQRTRVGPFRVEEAVAPQAVTVAGLVDEAALVADLPRRELDEAGRVAALHGRPVPAGKGEEGRVALFAGGHLIAVAERVGELLKPRVVVAE*