ggKbase home page

13_1_40cm_3_scaffold_34790_12

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(12229..13524)

Top 3 Functional Annotations

Value Algorithm Source
capsular exopolysaccharide family protein (EC:2.7.10.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 460.0
  • Bit_score: 479
  • Evalue 4.30e-132
capsular exopolysaccharide family protein (EC:2.7.10.2) similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 457.0
  • Bit_score: 225
  • Evalue 3.00e-56
Capsular exopolysaccharide family id=4829212 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 445.0
  • Bit_score: 236
  • Evalue 4.50e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAGCTTCGAGCCGCGCGATACTCAGGGCCAGGCGCATCTGAACGACTACCTCCGGATGCTGTGGAAGCACCGGTGGCTCCTCACCGTAGTCTTCCTCCTCACGGCGGTGACGGGAGCGATCTGGACCCTCGCCCAGACGCCCATCTACCAGGCCTCGGCCACCGTGCTCATCGAGCCCGAGCTGCCCAAGATCCTGAACATCCAGGAGATCACCAATCCCGGCATGGGCTCCCTCGAGTACTACCGGACGCAGTACGCGCTGATGACGAGCCGCCCCGTGATGGAAAACACCGTGGCCGCCCTCAAGCGCCAGGGCCGTTCGGCCGCCCTCGCTGCCCTCGGCGCGGGCACGGATCCGCGAGTCAAGCACATGGGCGTGGTGTCCGTCGAGCCCATCCGCAACACGCAGCTCGTCCTCGTCCGCTTCGAGCACTCCGATCCCGTCCTCGCCGCCGAGGTGGCCACGACGGTGGCGCAGGCCTACGTCAAGTACAACCTCGACTCCAAGCTCAAGGGCTCGCGCGACGCCCTCGTGTGGCTGAACGAGCAGATGTCCGCGCTCCGGCGCGTCAAGTCCGGGATTCTCGGCATCCAGGAGCAGCGAGTGCTGACCGCGCAGAAGGCCCAGGAGGTCAACCGCTCGCACCTCGACGCGCAGGCGCGACGGCTGTCCATCGAGTCCAAGCTGCGCGAGCTGAACCGGATCGCCAAGGAGCAGGCGAGCACGGACAGCCTCACCACGTCCATCGAGGACCCTCTCATCGGCAAGCTCAAGGCCGAGATGGCGGACCTCCAGGTCCAGCGCTCCAAGCTCCTCCAGACCTACAAGGACAAGCACCCCGAGGTTCTCAAGGTGGACGCGCAGATCCAGCAGCTCGCCCAGCGCATGGACGCGGAGATCCAGAAGTCCCTGCGCGCCCTCGACACCGAGTACAAGGTCGCCCGGGCGCGCGAGGACAGCCTGATGGGCGCGGTGAACCGGCTGCGCTCCGAGGATTCGAACCAGCAGCTGTACGAGGCGATGCTCAAGCGCCTGAAGGAGACGGGCGTGGCGGGCGGCCTCGACACCAACAACGCGCGCGTGGTCGAGGACGCGCCCGTGCCGGGAATCCCCGTGCGCCCGCGCAAGACCTTCGGGCTCATGATGAGCGTGCTCCTCGGGCTGGGGCTGGGCGTGGCCGCCGTGGTGGGCGTCGAGTACTTCGACCGCAGCGTCAAGTCACCGGAGGACGTCGAGCGGTTGCTCGGCCTGCCCGTGATCGCCGTCGTCCCCGCGTTCGCGTCGAGGCGCTGA
PROTEIN sequence
Length: 432
MSFEPRDTQGQAHLNDYLRMLWKHRWLLTVVFLLTAVTGAIWTLAQTPIYQASATVLIEPELPKILNIQEITNPGMGSLEYYRTQYALMTSRPVMENTVAALKRQGRSAALAALGAGTDPRVKHMGVVSVEPIRNTQLVLVRFEHSDPVLAAEVATTVAQAYVKYNLDSKLKGSRDALVWLNEQMSALRRVKSGILGIQEQRVLTAQKAQEVNRSHLDAQARRLSIESKLRELNRIAKEQASTDSLTTSIEDPLIGKLKAEMADLQVQRSKLLQTYKDKHPEVLKVDAQIQQLAQRMDAEIQKSLRALDTEYKVARAREDSLMGAVNRLRSEDSNQQLYEAMLKRLKETGVAGGLDTNNARVVEDAPVPGIPVRPRKTFGLMMSVLLGLGLGVAAVVGVEYFDRSVKSPEDVERLLGLPVIAVVPAFASRR*