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13_1_40cm_3_scaffold_5691_6

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(5649..6323)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 230.0
  • Bit_score: 293
  • Evalue 2.30e-76
Pseudouridine synthase n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZP40_THETH similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 225.0
  • Bit_score: 188
  • Evalue 5.70e-45
pseudouridine synthase Rsu similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 232.0
  • Bit_score: 220
  • Evalue 6.50e-55

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 675
GTGACCTCCCGGCGCAAGGCCGAGGAGCTGATCCGCGCCGGCCGCGTGAAGGTGGACGGCGCGGTCGCCGTTTTGGGCCAGTCGGTCGACGCGGAACGCCAGCGGGTCACCGTGGACGGCCGCGTGGTGCGGCCCGCCCGCACGGTCTGGCTGGCGCTCAACAAGCCGATCGGGTACGTGGTGAGCCGCGGGGACCCCGAGGGCCGGCCCACGGTCTTCCACCTCCTCCCCAAGGTGCCCGGGCTCACGTACGTTGGACGCCTGGACGTCATGACGTCCGGCCTGCTGCTGTTGACGACGGACGGGGCGGCGGCGCACCGGCTCATGCACCCGCGCTTTGCCGTGCCGCGCACCTACTGGCTCGGCGCGCACGGGCTGGCGGCGACCGCGGTGCAGCACGCCCTCACCGGCCGCATTGTCCTGGACGATCGGCCGGTGAAGGTCCTCGCGAGCCGCGTGCGGCCGGCCGGGAAGAGCGTGGAGGTCGAGGTGACGCTGGCGGAGGGACGGCAGCGCGTCGTGCGCCGCCTCGCCGAGCAGCTGGGGCTGAAGGTAGAATGGCTGCACCGCGTCGCGTACGGTCCCGTGCGCTTGGGGAAGCTGCCCGAAGGCCGGCACCGCGCCCTCACCCCACACGAGATCCGCGAGATCGAGCGATTGCATGGACCTGCGTGA
PROTEIN sequence
Length: 225
VTSRRKAEELIRAGRVKVDGAVAVLGQSVDAERQRVTVDGRVVRPARTVWLALNKPIGYVVSRGDPEGRPTVFHLLPKVPGLTYVGRLDVMTSGLLLLTTDGAAAHRLMHPRFAVPRTYWLGAHGLAATAVQHALTGRIVLDDRPVKVLASRVRPAGKSVEVEVTLAEGRQRVVRRLAEQLGLKVEWLHRVAYGPVRLGKLPEGRHRALTPHEIREIERLHGPA*