ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

13_1_40cm_3_scaffold_92_13

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(13379..14722)

Top 3 Functional Annotations

Value Algorithm Source
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=GWC2_Gemmatimonad similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 483.0
  • Bit_score: 428
  • Evalue 1.20e-116
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 502.0
  • Bit_score: 373
  • Evalue 3.20e-100
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 479.0
  • Bit_score: 427
  • Evalue 4.10e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1344
GTGAGTCGGCTGGCCGCGATTGTCGAGGCCCTGCGGACGGGCGGTCAGCTCGTCCGCGCGCCGGCGCCCCTTCCCGACATTACTGGGATCAGTTCTGACACCCGACACCTGACCCCGGGCACCTTGTTCTGCGCCGTGCGCGGCGTGGCGGAGGACGGGCACCGCTTCGTCGCGGAGGCAGCGCGGCGCGGCGCGGCCGCCGCGCTCGTCGAGCGCGAGGTGGACGCGCGGCTGCCGCAGATCCTCGTTAAAGACGGGCGGCGCGCCGCCGCCCTCGCGGCGGCCACGTTCTTCGACCACCCCGCCGCTCGACTGCAGCTCGTCGGGGTGACCGGCACGAGCGGCAAGACCACCTCGGTCGTTCTCGCCCGCCACGTGCTCGGCGCGCTGTGGCCCACGGGGGCGATCGGCACGCTGGGCGCATTCGACGCCGCCGGCGCGCCGGTCGAGAGCGAGGCCGGGAACCTCACGACCCCGGGTCCCATCGACCTCCAGGCCACGCTCGCCGCGCTGGTTGCGCGCGGGGCCAAGGCGGCCGCGATGGAAGTCTCGCGCGCCGGGATTTTCACGAACCTCTCCCGCGATCACCTCGACTATCACCAGACGCTCGAGGCGTATCTCGCCGCCAAGGCGAAGCTCGTTGCCTACCTCTCCCCCGACGGGGTCGCCGTGGTCAATGCGGACGACCCTGCCTGGGCGGGACTCCCCAACGGGCATCGCCGCGTGCGCTTCAGCGAGCGTGCCCAGGCGGACGTGTGGGCGGAGGCGATCGTCGCCACGCCCGCCGGCTCGACCTTCGACTTGCGCACGTCGGCCGGGCGCTGGCCTGTCACCCTGCCGCTGCTCGGCCGCTTCAACGTCGCGAACGCGCTGGGCGTCGCCGGCTGCGCGATCGCCCTCGGCGCAGCGGCGGCGGAGGTCGCCCGGCGGTTATGCAGCGCGCCGCAAGTCCCGGGGCGGATGGAGCGCATTGCGAGCCGGCCCTGCACGATCCTGCGCGACTACTCGCACAAGCCCGACGCCCTGGAGCGCGCGCTCGAGACCGTGCGCGGGTTCACGTCGGGTCGGGTGGTGCGCCTGGCCGACGTCGCCATCGTGACCTCCGACAATCCGCGCACGGAAGATCCCGAACGGATCCTCGACGAGATCGAAGTTGGGATGCGCGCCAAGCCGCACCACCGCGAGCCAGATCGGCGCCGCGCCATCGCCCTGGCGTTGGGGCTCGCCCGCGCGCAAGACACGATCCTCCTCGCCGGCAAAGGGCACGAGACGTATCAGATCATCGGCACCGAGAAGCAGCACTTCGACGAGCGCGAGATTGTGCGGGAGCTGGGCGCCGAATGA
PROTEIN sequence
Length: 448
VSRLAAIVEALRTGGQLVRAPAPLPDITGISSDTRHLTPGTLFCAVRGVAEDGHRFVAEAARRGAAAALVEREVDARLPQILVKDGRRAAALAAATFFDHPAARLQLVGVTGTSGKTTSVVLARHVLGALWPTGAIGTLGAFDAAGAPVESEAGNLTTPGPIDLQATLAALVARGAKAAAMEVSRAGIFTNLSRDHLDYHQTLEAYLAAKAKLVAYLSPDGVAVVNADDPAWAGLPNGHRRVRFSERAQADVWAEAIVATPAGSTFDLRTSAGRWPVTLPLLGRFNVANALGVAGCAIALGAAAAEVARRLCSAPQVPGRMERIASRPCTILRDYSHKPDALERALETVRGFTSGRVVRLADVAIVTSDNPRTEDPERILDEIEVGMRAKPHHREPDRRRAIALALGLARAQDTILLAGKGHETYQIIGTEKQHFDEREIVRELGAE*