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13_2_20cm_scaffold_2299_7

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: 8405..9022

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated channel n=1 Tax=Salisaeta longa RepID=UPI0003B68C06 similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 195.0
  • Bit_score: 130
  • Evalue 2.20e-27
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 209.0
  • Bit_score: 119
  • Evalue 1.10e-24
TonB-dependent receptor {ECO:0000313|EMBL:AHJ95851.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.0
  • Coverage: 209.0
  • Bit_score: 119
  • Evalue 5.40e-24

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Taxonomy

Hymenobacter swuensis → Hymenobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 618
ATGGTGACAGCCATGCACCTCCTCGCGTTGGCCCTCCTGTTGGTCGAGCCAGCCCCCGGCGACACCCTTTCCGGCCGCGTCACGGACCCGGACGGGGCTCCGGTTCCCGCGGCGACCGTCCTCATCTCCGAGCTGCACCGCGTCGCCACGAGCGGCGCCGACGGCGCGTTCCGCCTCGCCGACATCCCACCCGGAGAGTACACGGTCATCGTCCGCCACATCGGGTTTGCGCCGTTCGCGCGCGAGGTCCAAGTTCACGGGCCCACGACCCTCACGGTTACGTTGCGCCGGGCGCCCGTGTGGCTCGAGCCGGTCACCATTACTGCCACGCGCGCCCCCAGCGCGGCGCTCGGCTCGCCGCTCTCGGCGGCGGCGCTCTCGGAGGACGGCCTGCGGCGCGACCAGAGCGTATCACTGGCGCATTCGCTCGCCCGGCTTCCCGGCGTCAACGCGCTGAGCACCGGCGCCCAGATCGGCAAGCCGGTAATCCGGGGCCTCGCGGGCGCCCGGGTGCTGGTGCTCGCCAACGGGAACCGTCTGGAAGATTACTCGTGGAGTGACGAGGACGGGCCGTCGGCAGCGTGCTGTACGGATCGGATGCGCTGGGCGGCGTGGTGA
PROTEIN sequence
Length: 206
MVTAMHLLALALLLVEPAPGDTLSGRVTDPDGAPVPAATVLISELHRVATSGADGAFRLADIPPGEYTVIVRHIGFAPFAREVQVHGPTTLTVTLRRAPVWLEPVTITATRAPSAALGSPLSAAALSEDGLRRDQSVSLAHSLARLPGVNALSTGAQIGKPVIRGLAGARVLVLANGNRLEDYSWSDEDGPSAACCTDRMRWAAW*