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13_1_40cm_scaffold_2253_8

Organism: 13_1_40CM_Gemmatimonadetes_66_11

partial RP 4 / 55 MC: 2 BSCG 11 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: comp(4653..4967)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 102.0
  • Bit_score: 170
  • Evalue 9.70e-40
DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 102.0
  • Bit_score: 187
  • Evalue 8.20e-45
histone family protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 96.0
  • Bit_score: 170
  • Evalue 2.70e-40

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 315
ATGACGAAGGCTGATCTGGTCGAAAAGGTCACCGCGCAAATCGCTCGCACTGCCGGTCCCCTCATTTCGAAAAAGGACTGTGCGCGCGTTGTGGACTCCTTCCTTGACGCCGTGAAAGCAGCGCTGGCTGAGCAGCATAACATTGAGATACGCGGGTTTGGGACGTTCAAAATCCGCCAGCGGAAGACGCGCATGGCGCGTAACCCGAGAACCGGTGATCCCGTCGAAGTCGCGGCGCGCCCGGTACCTGTCTTCAAGCCCAGCAAGGAGTTGCGCGCGATGGTCGCGGACGCGAGCGCGCGCGTTTCGTCCTAA
PROTEIN sequence
Length: 105
MTKADLVEKVTAQIARTAGPLISKKDCARVVDSFLDAVKAALAEQHNIEIRGFGTFKIRQRKTRMARNPRTGDPVEVAARPVPVFKPSKELRAMVADASARVSS*