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13_1_40cm_scaffold_2259_11

Organism: 13_1_40CM_Gemmatimonadetes_66_11

partial RP 4 / 55 MC: 2 BSCG 11 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: comp(8531..8755)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 68.0
  • Bit_score: 96
  • Evalue 1.80e-17
tRNA pseudouridine synthase A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 71.0
  • Bit_score: 91
  • Evalue 3.10e-16
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 68.0
  • Bit_score: 96
  • Evalue 3.60e-18

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 225
ATGGCGTTCACGGTCGAGGCCGATCGATTCCTGCACCACATGGTGCGATTCCTCGTGGGCACCATGGTCGACATCGCCCTTGGCCGGCGCCCGCCGGCGGACTTCCCCCGTCTGCTCGCTGCGACCGATAATCTGGCGGCCAGCCCGCCTGCCCCGCCCCAGGGCTTGTATCTGGAGGCGGTGCAGTATCCCCCGGACCTCTACGCCGAGGAGTCTACGTCATGA
PROTEIN sequence
Length: 75
MAFTVEADRFLHHMVRFLVGTMVDIALGRRPPADFPRLLAATDNLAASPPAPPQGLYLEAVQYPPDLYAEESTS*