ggKbase home page

13_1_40cm_scaffold_6428_12

Organism: 13_1_40CM_Gemmatimonadetes_66_11

partial RP 4 / 55 MC: 2 BSCG 11 / 51 MC: 1 ASCG 8 / 38 MC: 2
Location: 10326..10841

Top 3 Functional Annotations

Value Algorithm Source
igma-70 family RNA polymerase sigma factor n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002557ADA similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 156.0
  • Bit_score: 138
  • Evalue 8.80e-30
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EDM75774.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; P similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 158.0
  • Bit_score: 136
  • Evalue 4.70e-29
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 158.0
  • Bit_score: 109
  • Evalue 7.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Plesiocystis pacifica → Plesiocystis → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGCCGGAGTCCACACACAGAGCCGCTGACGCCGACTTCGACGCTGTGATCCGCGCCCACGGGGATGCACTCGAGCGTGTCGCGTGGGGCTACGTCGACAACGCCTCCGACCGCGACGATCTCGTGCAGGAGATCCTGATGGCGCTGTGGCGCGCGCTGCCCCGGTTTCGCGGGGAGTCGTCCGTGCGCACGTTCGTGCTGCGCGTGGCGCACAACCGTGGCATCACGTTCGCGCTGCGGCGGCGCCGGTTTGAGGACCTGCCGGAGGACGGTCGTCTCGCCGACCCTGCGCCCCTCGCCGAAGAGCGGCTGATCGAAGAGCAGCATCGGGACCGGTTGCTCCGCGCCATTCGTCACCTCCCGGCGGCGCAACGCCAGGCCGTCATGATGCATCTCGAAGGGCTCTCGCAGCGGGAAATCGCGGAACTCCAGGACACGAGCGAGGGCAACGTCGGCGTGCGGCTCACGCGGGCACGCAAGGCGCTCCGCGCCCTGCTGGCCGAGAAAGAACGATGA
PROTEIN sequence
Length: 172
MPESTHRAADADFDAVIRAHGDALERVAWGYVDNASDRDDLVQEILMALWRALPRFRGESSVRTFVLRVAHNRGITFALRRRRFEDLPEDGRLADPAPLAEERLIEEQHRDRLLRAIRHLPAAQRQAVMMHLEGLSQREIAELQDTSEGNVGVRLTRARKALRALLAEKER*