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13_1_40cm_scaffold_2014_4

Organism: 13_1_40CM_Gemmatimonadetes_70_11

partial RP 14 / 55 MC: 2 BSCG 16 / 51 MC: 3 ASCG 7 / 38
Location: comp(4323..6680)

Top 3 Functional Annotations

Value Algorithm Source
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 778.0
  • Bit_score: 1028
  • Evalue 0.0
topA; DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 803.0
  • Bit_score: 893
  • Evalue 4.60e-257
DNA topoisomerase 1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABE5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 802.0
  • Bit_score: 893
  • Evalue 1.60e-256

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2358
GTGGCTGCTAAGAAGAAGGCTGTGACCCGGAAGAAATCCCGAGCGCCCAAGGCGCGGCCCCACGCGCGCGTCCCGCCCGCGCCCGCCGGCAATGGCGCGCTCGTCATCGTCGAGTCGCCGACCAAGGCCAAGACCATCGGCAAGTACCTGGGCCGCGGCTATACGGTGAAGGCGACAGTCGGCCACGTCCGCGACCTGCCCAAGCGCGAGCTCGGCGTCGATGTCGAGCACGGCTTCACCCCGACGTACGTCACCATCAAGGAAAAGGCGAAGACGCTGGCCGAGATCAAGAAGGCGGCCAAGGCGTCCGAGCGCGTGCTGATCGCGACCGACCCCGACCGCGAGGGCGAAGCGATCGCCTGGCACGTGGCCGGCCAGCTGGGCAACGGCGGCAAAGTGCAGCGCGTGCTGTTCCACGAGATCACCAAGGACGCCGTGGCGCAGGCGCTCGCCCATCCGCTCGACATCGACCAGCGCAAGGTGGACGCCCAGCAGGCACGGCGGGTGCTGGACCGGCTGGTGGGCTACAAGGCGTCCCCACTCCTGTGGAAGAGCATCAAAACGGGCCTCTCGGCCGGTCGCGTGCAGACCGTGGCGTTGCGGCTGATCTGCGAGCGCGAAGCCGAGATCCGCGCCTTCACGCCGCAGGAGTACTGGACGGTCGAGGCCGATCTGGAAAAGGACGGCCAGGCGTTCCAGGCGCGGCTGCACAAGCTCGACGGCCACAAGCCGGACATCAAGGACGCCGCGACGGCGCAAGCGATCGTGGCCGACGCCCGGCGCCTGCCGTTCGTCGTCACCACGGTTGAAAAGGGCGAGCGGCGCCGGCCCGCCCCCCCGCCGTTCCGCACCAGCACGCTGCAGCAGGAAGCGGCGAAACAGCTCGGCTTTTCGGCCGCGCGCACGATGCGGGCGGCGCAGCGACTGTACGAAGGCGCGGAGATCGGCGACGAAGGGCCGGTGGGCCTCATCACCTACATGCGCACCGACTCCATCCGCGTCGCCGACAGCGCCGTGGCGCAGGCCCGGCAGTTCATCGGCCGGACGTTCGACGCCCGCTACCTGCCCGCCGCGCCGGTCGCCCACAAGGAAGGGAAGGGCCAGTCGCGCGTCCAGGACGCGCACGAGGCGATCCGCCCGACCGAGGTCAAGCGCCGGCCCGAGGAGATCAAGAAGCACCTCGAGTCCGACCTGTTCAAGCTGTACCAGCTGATTTGGCGGCGCTTCGTGGCCTCGCAAATGACGCCGGCGGTGTTCGAGACGACCAAGGTGGACTTCGACCTCGGTCGCTTCGTGTTCCGCGCCACGGGCTCGCGCATGCTGTTCGACGGCTACCACGCCCTCTACCACGAAGCCCACGAGCCGGAGGAAGGCAAGACCCTCGAGGACCTGCCCCCGATCCCGGCGCTGGTCCAGGGGGACCACGTCACCGTGCGCGGCCTCACGCCCAACCAGCACTTCACCGAGCCGCCGCCGCGCTACAGCGAGGCCAGCCTCGTGAAGGAGCTGGAGCGGCTGGGCATCGGCCGGCCGTCGACGTACGCGACGATCATCTCGACGCTGCGCACCCGCTGGTACGCCACTGCCAAGGACCGCCGCTTCGCGCCCACCCCGCAAGGCGAGACGGTGTGGAAGGTGATGAAGCGCTGCTTCCCGGAGGTGTTCGAGGTCGGCTTCACCGCGCAAATGGAGACCGAGCTCGACAAGGTGGAGGAGGGCGACCTGGGCTGGCAGCAAGTGTTGGGGGACTTCTGGGGCCCCTTCTCCAAGGCGCTGGCCGCGGTGGACGTCCGGCAGATCATCCACGACGTGCACGATCTCTCGACCCTGCACGAGGAGCGCTGCCCGACCTGCGGGAGCCCCGTCGAAGTGCGCAGCGGGCGGTTCGGGCCGTTCATCGCCTGCACCCGCTACCCCAAGGAGTGCACCTTCTCCCGGTCGCTGAAGAAGGACAAGGTGCCCGACCGGCCGTCGGACGTGGTATGCAAGGAGTGCGGGGCGCCGATGGTCGTGAAGACGGGACGCTACGGCGAGTTCCTGGCGTGCACGCGGTACCCCCAATGCAAGTACACCCAACCCGTGCCGCTGGGCGTGAAGTGCCCGAAGTGCGGCGTGGGGGACCTCGCCGAGCGGCGCACCCGCAAGGGACGGAACTTCTTCGGCTGCCTGCGCTACCCCGACTGCGACTTCTCGACGTGGACCAAGCCGGTGGCCGAGCCCTGTCCGAGCTGCGGGTTCGTGGGCATGGAGCACAAACCGATCAAGACCGGGGGGGAGGGAGTAACCCGCAAGTGTCTGAAGTGCGGTCACGAAGACACGCTCGCCGAGAGCGGCCCGGCGGAGCCGAGCGCGGCCTGA
PROTEIN sequence
Length: 786
VAAKKKAVTRKKSRAPKARPHARVPPAPAGNGALVIVESPTKAKTIGKYLGRGYTVKATVGHVRDLPKRELGVDVEHGFTPTYVTIKEKAKTLAEIKKAAKASERVLIATDPDREGEAIAWHVAGQLGNGGKVQRVLFHEITKDAVAQALAHPLDIDQRKVDAQQARRVLDRLVGYKASPLLWKSIKTGLSAGRVQTVALRLICEREAEIRAFTPQEYWTVEADLEKDGQAFQARLHKLDGHKPDIKDAATAQAIVADARRLPFVVTTVEKGERRRPAPPPFRTSTLQQEAAKQLGFSAARTMRAAQRLYEGAEIGDEGPVGLITYMRTDSIRVADSAVAQARQFIGRTFDARYLPAAPVAHKEGKGQSRVQDAHEAIRPTEVKRRPEEIKKHLESDLFKLYQLIWRRFVASQMTPAVFETTKVDFDLGRFVFRATGSRMLFDGYHALYHEAHEPEEGKTLEDLPPIPALVQGDHVTVRGLTPNQHFTEPPPRYSEASLVKELERLGIGRPSTYATIISTLRTRWYATAKDRRFAPTPQGETVWKVMKRCFPEVFEVGFTAQMETELDKVEEGDLGWQQVLGDFWGPFSKALAAVDVRQIIHDVHDLSTLHEERCPTCGSPVEVRSGRFGPFIACTRYPKECTFSRSLKKDKVPDRPSDVVCKECGAPMVVKTGRYGEFLACTRYPQCKYTQPVPLGVKCPKCGVGDLAERRTRKGRNFFGCLRYPDCDFSTWTKPVAEPCPSCGFVGMEHKPIKTGGEGVTRKCLKCGHEDTLAESGPAEPSAA*