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13_1_40cm_scaffold_4999_12

Organism: 13_1_40CM_Gemmatimonadetes_70_11

partial RP 14 / 55 MC: 2 BSCG 16 / 51 MC: 3 ASCG 7 / 38
Location: 11896..13140

Top 3 Functional Annotations

Value Algorithm Source
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 415.0
  • Bit_score: 641
  • Evalue 1.10e-180
MacB-like periplasmic core domain protein similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 414.0
  • Bit_score: 539
  • Evalue 1.20e-150
ABC efflux pump, inner membrane subunit id=24436238 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 417.0
  • Bit_score: 305
  • Evalue 7.70e-80

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1245
ATGCAGCTCACCGAAGCCATCCGTCTCGCCCTGCTGGCCGCCTGGAGCCACAAGTTGCGGTCGTTCTTCACGCTCCTCGGGATCATCGTGTCGGTGGCGTTTCTGGTCGCCGTGGTGGCGGTGATCCAGGGCATGAACGCTTATGTGCGAGAGAACCTCACCGGCGCCATCGTCGGCGTGAACGCCTTCCAGGTGCGGCGCACGCCGATCCAGATCGGCTTCGTCGACGATGAGGCGCTGCGGGCAATCCAGCGCCGGCCGATTATCGCGCCGGAGGACGTGCCGTACGTCGCGCGGGCCCTGCCGGACGCGCAAGCCGTCGCCCTCCAATCGGGGTGGCCGACTCCGCAAGCCGACGTGGTATGGCGCAACAAGACCGTGGGCGACGTCCTGGTTTTCGGCGTGACGCCGCCGTTCCAGGCGGTGGAGGACTACGAGTTCGCCGCGGGGGACCCCCTCGCGGACATCGACGTGTATGAGCGCCGGCCGGTGGCGGAACTCGGGTGGGACGTGGCCGACAAGCTCTTCGGCAACCCGGCCCAGGCGGTGGGGCAGAAGATCCGCATCCGCGGCCAGCAGTTCGTGGTCAAGGGCGTGATCGCCAAAAAGGGCACGGTGCTCGGCCAATCGTGGGACGGCTTCGTGATGTTGCCGTTCACGACGTTCGAGGCGATGTACGGGCGGCGACAAACCGCGGTGATCTCGGTCAAGATGGCCACGGCGGACGCGGTGGCCGAAGGGATGACGCGGGCGGAGGAGGCGATGCGGATCGCCCACCGGCTGCGCCCCGGTCAGGGGGACGACTTCAGCGTCGACACCGCCGAGGGCCTGGTCGCCTTCTGGAAGAGCCTGACGCGTGTGCTGTTCACCGTCGTGCCCGCCGTCGTGGCGATCGGCATCGTCGTGGGCGGGATCGTGATCATGAACATCATGCTCATGAGCGTGAACGAGCGGACGCGCGAGATCGGGATCCGCAAGTCGCTCGGCGCCCGGCGGCGCGACATCCGTAACCAGTTCCTGGCGGAATCGGTCACGCTCGCGGTATTGGGCGGCGTGCTGGGCTTGGCGACCGGGATCGCGCTGGCCGGGCTGGTGGATCTGTTGTCGCCGCTCCCCGCCCGCGTCACGCTGTGGTCGGTCGCCGTCGCGCTGGGGCTGGGGGCCTCGGTGGGCGTGCTCTTCGGGGTGTATCCGGCCATGCGCGCGGCGCGGCTCGATCCGATTACCGCCTTGCGGTATGAATGA
PROTEIN sequence
Length: 415
MQLTEAIRLALLAAWSHKLRSFFTLLGIIVSVAFLVAVVAVIQGMNAYVRENLTGAIVGVNAFQVRRTPIQIGFVDDEALRAIQRRPIIAPEDVPYVARALPDAQAVALQSGWPTPQADVVWRNKTVGDVLVFGVTPPFQAVEDYEFAAGDPLADIDVYERRPVAELGWDVADKLFGNPAQAVGQKIRIRGQQFVVKGVIAKKGTVLGQSWDGFVMLPFTTFEAMYGRRQTAVISVKMATADAVAEGMTRAEEAMRIAHRLRPGQGDDFSVDTAEGLVAFWKSLTRVLFTVVPAVVAIGIVVGGIVIMNIMLMSVNERTREIGIRKSLGARRRDIRNQFLAESVTLAVLGGVLGLATGIALAGLVDLLSPLPARVTLWSVAVALGLGASVGVLFGVYPAMRAARLDPITALRYE*