ggKbase home page

13_1_40cm_2_scaffold_166975_3

Organism: 13_1_40CM_2_Gemmatimonadetes_60_3

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: comp(1459..2073)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 190.0
  • Bit_score: 279
  • Evalue 5.30e-72
Ribonuclease Y n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A488_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 190.0
  • Bit_score: 252
  • Evalue 3.80e-64
2',3'-cyclic-nucleotide 2'-phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 190.0
  • Bit_score: 279
  • Evalue 1.10e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 615
CGGGGCCGTCGCGAAGAAGTCGAGCGCGAAGAGCGCAAGGTAGAGGACCGCGAGGGCCAGCTCAATCGCAAGTATGATCTTCTCGAGCAGCGAGAGCGCGAGACGACGCGACGTGTCGAGGGTCTCGGAAACCGCGAAAAAACCCTCACTCAGCGCGAGCAGGAGCTCGAGAAACTCCTCGGCGAAGAGAAACGGCGCCTGGAGCAGCTCGCCGGAATTTCCGCCGCTGACGCCAAAGCGGAGCTGATGCATCGGATGGAGGAAGAAGCGCAGGCCGATGCGGCAAACCAAATCCGCGAGATCCGCGAGACTGCCAAACGAAACGCCGAGCGTGAAGCAAAGAAAATCATCGCGCTGGCGATTCAGCGGATCGCCGCCGAGCAAAGCGTGGAAGCTACCGTCTCAGCTGTGTCGCTCCCCAACGATGAGATGAAGGGACGCATCATCGGCCGCGAAGGAAGGAATATTCGCGCGTTCGAGCTCGCCACCGGCGTCGACGTAATCATTGATGACACCCCGGATACCGTCGTCGTCTCCTGCTTCGACCCCGTTCGGAGGGAGATCGCGAGANNNNNNNNNNNNNNNNNNNNNNNNAGGAAGGCGAAGCATCAATAG
PROTEIN sequence
Length: 205
RGRREEVEREERKVEDREGQLNRKYDLLEQRERETTRRVEGLGNREKTLTQREQELEKLLGEEKRRLEQLAGISAADAKAELMHRMEEEAQADAANQIREIRETAKRNAEREAKKIIALAIQRIAAEQSVEATVSAVSLPNDEMKGRIIGREGRNIRAFELATGVDVIIDDTPDTVVVSCFDPVRREIARXXXXXXXXRKAKHQ*