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13_1_40CM_2_Gemmatimonadetes_60_3

In projects: 13_1_40CM_2  |  angelo_ncbi_2016  |  gemmatimonadetes_ggkbase  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Metagenomic Context

Parent: 13_1_40cm_2_UNK

Properties

Avg. coverage: 2.82 Longest contig: 8.80 Kbp Bin length: 1.97 Mbp GC content: 59.98 %
Contigs count: 1121 Features count: 2468 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2
Displaying items 501-550 of 1121 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_40cm_2_scaffold_368151
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1419 bp 60.25 2.64 99.79
13_1_40cm_2_scaffold_258310
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1192 bp 57.55 1.51 80.03
13_1_40cm_2_scaffold_391166
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1326 bp 59.50 3.18 96.15
13_1_40cm_2_scaffold_218034
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1299 bp 61.20 1.73 86.14
13_1_40cm_2_scaffold_175563
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1444 bp 59.90 3.32 79.36
13_1_40cm_2_scaffold_156945
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1524 bp 60.30 2.85 100.59
13_1_40cm_2_scaffold_194536
Species: Gemmatimonas aurantiaca (50%)
2 1375 bp 59.27 2.62 99.49
13_1_40cm_2_scaffold_274110
Species: Gemmatimonas aurantiaca (50%)
2 1157 bp 57.30 3.89 92.31
13_1_40cm_2_scaffold_121341
Species: Gemmatimonas aurantiaca (50%)
2 1733 bp 57.70 2.51 99.71
13_1_40cm_2_scaffold_294784
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1117 bp 59.00 2.55 96.96
13_1_40cm_2_scaffold_130240
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1673 bp 59.71 2.87 99.34
13_1_40cm_2_scaffold_119781
Species: R_Gemmatimonadetes_71_11 (50%)
2 2228 bp 57.76 2.36 78.23
13_1_40cm_2_scaffold_109226
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1825 bp 60.27 3.45 98.47
13_1_40cm_2_scaffold_180023
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1427 bp 58.65 2.10 98.39
13_1_40cm_2_scaffold_39618
Species: Gemmatimonas aurantiaca (50%)
2 2934 bp 60.50 3.02 99.80
13_1_40cm_2_scaffold_188197
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1397 bp 58.41 3.33 100.07
13_1_40cm_2_scaffold_253752
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1203 bp 58.44 2.12 97.01
13_1_40cm_2_scaffold_129783
Species: RBG_16_Acidobacteria_70_10_curated (50%)
2 1676 bp 59.67 1.79 82.16
13_1_40cm_2_scaffold_245963
Species: Nitrosomonas communis (50%)
2 1222 bp 59.98 3.19 59.17
13_1_40cm_2_scaffold_434912
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1354 bp 62.33 2.99 99.93
13_1_40cm_2_scaffold_155041
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1533 bp 60.47 4.01 97.06
13_1_40cm_2_scaffold_251976
Species: CG_Anaero_02 (50%)
2 1207 bp 59.65 1.49 70.84
13_1_40cm_2_scaffold_330101
Species: R_Ignavibacteria_55_14 (50%)
2 1449 bp 57.83 2.01 90.27
13_1_40cm_2_scaffold_284780
Species: R_Gemmatimonadetes_71_11 (50%)
2 1730 bp 58.21 2.77 86.71
13_1_40cm_2_scaffold_180026
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1427 bp 58.72 2.10 75.89
13_1_40cm_2_scaffold_128712
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1682 bp 59.63 2.59 99.88
13_1_40cm_2_scaffold_47804
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 2697 bp 59.40 2.50 96.22
13_1_40cm_2_scaffold_299189
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1108 bp 59.66 1.62 93.41
13_1_40cm_2_scaffold_281866
Species: Gemmatimonas aurantiaca (50%)
2 1777 bp 58.92 1.86 99.77
13_1_40cm_2_scaffold_240249
Species: RBG_16_Gemmatimonadetes_66_8_curated (100%)
2 1237 bp 60.39 1.94 89.73
13_1_40cm_2_scaffold_247349
Species: marine sediment metagenome (50%)
2 1219 bp 62.43 2.34 92.78
13_1_40cm_2_scaffold_320846
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
2 1069 bp 61.74 1.82 90.93
13_1_40cm_2_scaffold_170244
Species: RBG_16_Caldithrix_48_16_curated (50%)
2 1466 bp 57.98 1.74 87.59
13_1_40cm_2_scaffold_11474
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 4963 bp 62.34 4.05 97.38
13_1_40cm_2_scaffold_233295
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 2214 bp 60.34 3.46 76.83
13_1_40cm_2_scaffold_238010
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1243 bp 59.29 3.02 100.64
13_1_40cm_2_scaffold_345522
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1510 bp 57.88 5.07 98.94
13_1_40cm_2_scaffold_230783
Species: RBG_13_Acidobacteria_68_16_curated (50%)
2 1263 bp 59.46 2.02 97.86
13_1_40cm_2_scaffold_514069
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1226 bp 58.65 1.71 98.61
13_1_40cm_2_scaffold_344077
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1022 bp 57.34 2.20 82.49
13_1_40cm_2_scaffold_82262
Species: Sphingomonas changbaiensis (50%)
2 2095 bp 58.71 2.36 82.77
13_1_40cm_2_scaffold_80967
Species: RBG_16_Acidobacteria_68_9_curated (50%)
2 2112 bp 62.50 2.84 88.21
13_1_40cm_2_scaffold_77684
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 2153 bp 59.96 2.30 73.57
13_1_40cm_2_scaffold_310733
Species: Pyrinomonas methylaliphatogenes (50%)
2 1087 bp 59.06 1.66 90.80
13_1_40cm_2_scaffold_350046
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1009 bp 60.75 3.42 59.66
13_1_40cm_2_scaffold_309244
Species: BJP_IG2102_Desulfovibrionales_64_25 (50%)
2 1560 bp 57.63 4.81 80.38
13_1_40cm_2_scaffold_97836
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1926 bp 60.75 2.34 100.00
13_1_40cm_2_scaffold_326401
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1058 bp 58.79 1.70 99.81
13_1_40cm_2_scaffold_370104
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1543 bp 59.56 3.01 102.46
13_1_40cm_2_scaffold_230789
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1263 bp 62.15 2.61 84.80
Displaying items 501-550 of 1121 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.