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13_1_40CM_2_Gemmatimonadetes_60_3

In projects: 13_1_40CM_2  |  angelo_ncbi_2016  |  gemmatimonadetes_ggkbase  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Gemmatimonadetes  →  Bacteria

Metagenomic Context

Parent: 13_1_40cm_2_UNK

Properties

Avg. coverage: 2.82 Longest contig: 8.80 Kbp Bin length: 1.97 Mbp GC content: 59.98 %
Contigs count: 1121 Features count: 2468 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 40 / 55 MC: 4 BSCG 33 / 51 MC: 3 ASCG 8 / 38 MC: 2
Displaying items 351-400 of 1121 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_40cm_2_scaffold_451243
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1296 bp 58.87 2.55 86.81
13_1_40cm_2_scaffold_103877
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1870 bp 59.36 2.73 88.24
13_1_40cm_2_scaffold_252700
Species: Gemmatimonas aurantiaca (50%)
2 1206 bp 57.30 1.24 96.27
13_1_40cm_2_scaffold_305247
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1097 bp 59.53 2.19 85.32
13_1_40cm_2_scaffold_130171
Species: Candidatus Methanoperedens nitroreducens (50%)
2 1673 bp 58.70 2.60 91.99
13_1_40cm_2_scaffold_48014
Species: Gemmatimonas aurantiaca (50%)
2 2691 bp 58.42 3.29 88.52
13_1_40cm_2_scaffold_215247
Species: RLO_PLX_64_10 (50%)
2 2050 bp 59.90 2.56 64.39
13_1_40cm_2_scaffold_124694
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
2 1709 bp 57.58 5.00 87.24
13_1_40cm_2_scaffold_190112
Species: Gemmatimonas aurantiaca (50%)
2 1390 bp 62.30 2.70 98.63
13_1_40cm_2_scaffold_44565
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 2784 bp 59.38 3.45 71.23
13_1_40cm_2_scaffold_236633
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1247 bp 58.14 3.01 78.67
13_1_40cm_2_scaffold_138728
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1620 bp 61.23 2.59 99.63
13_1_40cm_2_scaffold_247044
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1220 bp 60.82 2.34 94.18
13_1_40cm_2_scaffold_187898
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1398 bp 60.66 2.25 99.57
13_1_40cm_2_scaffold_446772
Species: RBG_13_Caldithrix_44_9_curated (50%)
2 1354 bp 57.61 1.77 100.81
13_1_40cm_2_scaffold_331645
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1048 bp 61.83 4.87 97.33
13_1_40cm_2_scaffold_276438
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1152 bp 60.24 3.52 98.44
13_1_40cm_2_scaffold_85522
Species: Gemmatimonas aurantiaca (50%)
2 2056 bp 58.27 2.48 100.10
13_1_40cm_2_scaffold_201154
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1352 bp 59.39 2.22 99.63
13_1_40cm_2_scaffold_219358
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1296 bp 59.65 2.66 99.77
13_1_40cm_2_scaffold_334789
Species: RBG_16_Planctomycetes_55_9_curated (50%)
2 1042 bp 59.21 2.02 99.04
13_1_40cm_2_scaffold_205369
Species: RBG_16_RIF_WS3X_71_46_curated (100%)
2 1338 bp 62.26 2.35 98.43
13_1_40cm_2_scaffold_215255
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1308 bp 60.40 2.52 104.13
13_1_40cm_2_scaffold_247282
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1219 bp 59.56 2.58 87.12
13_1_40cm_2_scaffold_111107
Species: Sinomonas sp. MUSC 117 (50%)
2 1810 bp 59.89 2.32 86.85
13_1_40cm_2_scaffold_194016
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1376 bp 60.97 2.73 96.80
13_1_40cm_2_scaffold_473880
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1478 bp 62.25 5.07 88.09
13_1_40cm_2_scaffold_276127
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1153 bp 57.50 1.43 85.08
13_1_40cm_2_scaffold_140356
Species: RBG_13_Caldithrix_44_9_curated (50%)
2 1611 bp 58.41 2.89 76.16
13_1_40cm_2_scaffold_127664
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1689 bp 58.67 2.22 80.11
13_1_40cm_2_scaffold_126605
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1696 bp 60.44 2.30 73.41
13_1_40cm_2_scaffold_205034
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1339 bp 61.24 2.24 100.15
13_1_40cm_2_scaffold_336450
Species: Gemmatimonas aurantiaca (100%)
2 1039 bp 58.90 2.31 99.90
13_1_40cm_2_scaffold_134151
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1648 bp 62.38 2.64 82.46
13_1_40cm_2_scaffold_584535
Species: Gemmatimonas aurantiaca (100%)
2 1104 bp 57.34 2.45 100.27
13_1_40cm_2_scaffold_295714
Species: R_Gemmatimonadetes_71_11 (50%)
2 1115 bp 57.94 4.98 89.60
13_1_40cm_2_scaffold_127435
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 2336 bp 59.03 2.95 88.48
13_1_40cm_2_scaffold_121287
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1733 bp 60.47 4.24 98.67
13_1_40cm_2_scaffold_170412
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1465 bp 59.39 2.25 82.94
13_1_40cm_2_scaffold_227473
Species: Pyrinomonas methylaliphatogenes (50%)
2 1272 bp 61.08 1.77 86.56
13_1_40cm_2_scaffold_365722
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1573 bp 62.17 2.86 101.46
13_1_40cm_2_scaffold_251225
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1209 bp 62.03 2.98 89.08
13_1_40cm_2_scaffold_172912
Species: R_NC10_66_22 (50%)
2 1454 bp 57.70 1.86 96.35
13_1_40cm_2_scaffold_292973
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1120 bp 58.66 2.01 99.38
13_1_40cm_2_scaffold_128193
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1686 bp 59.79 2.14 100.00
13_1_40cm_2_scaffold_326337
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1058 bp 61.81 3.40 100.10
13_1_40cm_2_scaffold_219137
Species: RBG_13_Caldithrix_44_9_curated (50%)
2 1296 bp 58.95 1.62 87.50
13_1_40cm_2_scaffold_130418
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1671 bp 60.44 2.33 74.69
13_1_40cm_2_scaffold_140613
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1609 bp 59.35 3.92 93.97
13_1_40cm_2_scaffold_343158
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1024 bp 61.43 3.52 91.41
Displaying items 351-400 of 1121 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.