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13_1_40cm_scaffold_161

Search features with annotation key words

Displaying items 31-59 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_161_31
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(30566..31195)
DNA (630bp) protein (210aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQF6_ROSCS
two component LuxR family transcriptional regulator Tax=RBG_16_Chloroflexi_63_12_curated
two component LuxR family transcriptional regulator
13_1_40cm_scaffold_161_32
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(31206..31802)
DNA (597bp) protein (199aa)
Putative two-component histidine kinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1B6_CALAS
histidine kinase Tax=RBG_16_Chloroflexi_63_12_curated
putative two-component histidine kinase
13_1_40cm_scaffold_161_33
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(31870..33795)
DNA (1926bp) protein (642aa)
glucosamine-6-phosphate deaminase-like protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glucosamine-6-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A967_GEMAT
glucosamine-6-phosphate isomerase
13_1_40cm_scaffold_161_34
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

34066..35211
DNA (1146bp) protein (382aa)
Sensory box histidine kinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UI97_MYXSD
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensory box histidine kinase
13_1_40cm_scaffold_161_35
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

35271..36824
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031DFAC0
peptidase M28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M28
13_1_40cm_scaffold_161_36
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(36807..37292)
DNA (486bp) protein (162aa)
Glyoxalase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBI4_9RHIZ
glyoxalase/bleomycin resistance protein/dioxygenase; K07104 Tax=RBG_16_Gemmatimonadetes_66_8_curated
glyoxalase
13_1_40cm_scaffold_161_37
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

37333..38919
DNA (1587bp) protein (529aa)
NAD-dependent aldehyde dehydrogenase; K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEY1_RHOMR
13_1_40cm_scaffold_161_38
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38964..39518
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKB3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX08718.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_scaffold_161_39
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(39580..39756)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XPD1_9BACT id=73381 bin=ACD51 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_161_40
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

40391..41917
DNA (1527bp) protein (509aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9B4_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO33888.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain A
13_1_40cm_scaffold_161_41
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

42034..42576
DNA (543bp) protein (181aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89917.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_161_42
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

42573..43193
DNA (621bp) protein (207aa)
Glycoside hydrolase, family 13 domain protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LQ53_SYNFM
glycoside hydrolase family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
glycoside hydrolase family 13 protein
13_1_40cm_scaffold_161_43
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

43190..43858
DNA (669bp) protein (223aa)
hypothetical protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_scaffold_161_44
unknown

Not on your lists

44014..44250
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_scaffold_161_45
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(44257..45510)
DNA (1254bp) protein (418aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
13_1_40cm_scaffold_161_46
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

45597..46739
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA53_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_1 repeat-containing protein
13_1_40cm_scaffold_161_47
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(46764..47150)
DNA (387bp) protein (129aa)
DoxX family protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIV8_9BACT
DoxX family protein {ECO:0000313|EMBL:BAL56094.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
DoxX family protein
13_1_40cm_scaffold_161_48
unknown

Not on your lists

comp(47147..47512)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_scaffold_161_49
unknown

Not on your lists

comp(47512..48603)
DNA (1092bp) protein (364aa)

This feature has no annotations

13_1_40cm_scaffold_161_50
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48611..49393)
DNA (783bp) protein (261aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259, ECO:0000313|EMBL:KIL97961.1}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleB
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00031AAC26
UTP-glucose-1-phosphate uridylyltransferase
13_1_40cm_scaffold_161_51
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(49400..49975)
DNA (576bp) protein (192aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHI7_CORCM
cyclic nucleotide-binding domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
cyclic nucleotide-binding domain-containing protein
13_1_40cm_scaffold_161_52
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

50403..50924
DNA (522bp) protein (174aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_161_53
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

50927..51337
DNA (411bp) protein (137aa)
OsmC family protein n=2 Tax=Yersinia pseudotuberculosis RepID=A7FNR4_YERP3
hypothetical protein; K07397 putative redox protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
yhfA; protein yhfA
13_1_40cm_scaffold_161_54
unknown

Not on your lists

51351..51809
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_scaffold_161_55
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(51859..52128)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_161_56
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

52316..52609
DNA (294bp) protein (98aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_161_57
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

52569..53210
DNA (642bp) protein (214aa)
DsbA oxidoreductase n=1 Tax=uncultured bacterium RepID=K2FSI4_9BACT
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
DSBA oxidoreductase
13_1_40cm_scaffold_161_58
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

53210..53629
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L97_SYMTH
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_161_59
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

53642..53923
DNA (282bp) protein (94aa)
Probable potassium transport system protein kup n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B8H1_HERA2
kup; potassium uptake protein; K03549 KUP system potassium uptake protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
K potassium transporter
Displaying items 31-59 of 59 in total

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