ggKbase home page

13_1_40cm_scaffold_0_14

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: comp(11091..11930)

Top 3 Functional Annotations

Value Algorithm Source
dapE; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 278.0
  • Bit_score: 279
  • Evalue 4.30e-72
Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 279.0
  • Bit_score: 213
  • Evalue 2.70e-52
Diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 271.0
  • Bit_score: 223
  • Evalue 7.30e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 840
GTGGTCCGGCCGCATCTAGCGGGTCTGCCGATTTACAAGATGACGGGGTCGGGGAACGACTTCGTCATGGTGGATGGCCGGCACACATCGCCTGCGGACTGGTCCGAGGCCGACATCCGCGCCGTATGTGCCCGCGGCACCGGCGTCGGCGCGGACGGGCTGGTGTTCGTCAGTCCCGGATCGTCCAGGAACGCGGTGCGCATGATCTACTTCAACGCGGACGCGTCCCGCGCTGCGATGTGCGGCAACGCCGCGCTGTGCAGCACTCGGCTGGCCGCGCGGCTCGGCATCGCGCGGGCGCAGGGGATGACGCTCGAGACGGACGCCGGCAGTTACGAAAGCCGCTGCGGCGGTCCCGGGGAACGCGCCGAGCTGCGACTCGCCGCCGTGCGCCCCCCAACCGCTGTGCCGGGCCTCTCCGCAGCCGACGGCGAGCGCCGCGCGGCTCTCGGAATGGTCGGCGTCCCACACCTCATTGTGCTCGTCGATGACGTCAGCTGCCTCGACCTCGCCGATCGCGGCAGGATGCTGCGCTGCGATCCGGCCCTGGGACCCGACGGTGCCAATGTGAACTTCGTCTCTCCGGGGGGTTCGCCCTCCGAATGGCTGATGCGGACCTACGAGCGGGGAGTGGAGGCGGAAACGTTGGCGTGTGGAACCGGCGCCGTAGCGGCGAGCTGCGCGCTCGTGCAATGGGGGCTGGCGCAGCTGCCCGTGACCATCTGGACCCGCAGCGGCAGGCGCCTGGAGATCGAGGCCAAGCGACTGAACGACGGCACGTACGATGAGGTGTGGCTTTCGGGGGAGGCTCGGCTCGTGTTCAGGGGTGTGATTAACTGA
PROTEIN sequence
Length: 280
VVRPHLAGLPIYKMTGSGNDFVMVDGRHTSPADWSEADIRAVCARGTGVGADGLVFVSPGSSRNAVRMIYFNADASRAAMCGNAALCSTRLAARLGIARAQGMTLETDAGSYESRCGGPGERAELRLAAVRPPTAVPGLSAADGERRAALGMVGVPHLIVLVDDVSCLDLADRGRMLRCDPALGPDGANVNFVSPGGSPSEWLMRTYERGVEAETLACGTGAVAASCALVQWGLAQLPVTIWTRSGRRLEIEAKRLNDGTYDEVWLSGEARLVFRGVIN*