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13_1_40cm_scaffold_230_14

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: comp(13411..15060)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 561.0
  • Bit_score: 498
  • Evalue 1.10e-137
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 570.0
  • Bit_score: 619
  • Evalue 3.40e-174
SecD export membrane protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 569.0
  • Bit_score: 534
  • Evalue 5.00e-149

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1650
ATGCGCACGATTCGCAATCGAGTGATCGTCATCGTGGGGCTGGCGCTCCTCTCCGGCTGGCTCCTGCTCCCGAAGGACGTCACCCAACGGGTGCGTGACGTCGCGACCGGCCGCATGAAGGACACGACCGTGCGACGCGTCCCGATCAACCTCGGGCTCGACCTGCAGGGCGGAATCCACCTCGCGCTCGAAGTGGATCAGAGTAAGGGGCCCGTGCCCGATTGCGCCGATGCGATCCAGCGGGCGGAGCGGGTCGTGCGCAGCCGCATCGACGAGTTCGGCACGACGGAGCCCGTAGTGCAGATCCAGGGGCGCTGCCGCCTGATCGTCGAGCTCGCAGGAGAGAAGGACCCGGCGCGCGCCAAGAGCGTCATCCAGCGCACCGCGTTCCTCGAGTTTCGTATCACCGACATGAACAACCTGTTCCGCGACGCGCTCCCCGAGATCGATCGCGCCTTGCATGAGGCGGGGGTGCAGGTGGCGGGGCAGGCGACCGGGGCGAACGTCGCCCAACTGTTCGGCGCGGACACGAGCAAGGGCAAGAAGGGAAAGCCCGCCAAGGGTAAGGCCGCGAAGGACACGACCGAGCTGAACGCGCCCGGTGCGCTATCGTCGCTGCTGTTCCAAGGCTCGCTCCCGGGCGAGTACCTCGTGCCCGAGGAGCAGGTGCCGGCGGCCGAGAGCCTGCTGGCCCGGCCCGAGGTACAGCGCCTCATCCCGCGAGGGATCAATCTCAAGTGGGGTACCGAGGTCGCGTCGCGCGGCGCGCGGGCGTACCGCGCGCTGTACGCGGTCGAGGACCGGCCGATCATCACGGGGGAGGAGCTCGAGAAGGCGACGGCCCGCCGCGACCCCGTGACCAACCAGTCGGTGGTGGACTTCGTGCTGTCGCGCAGCGGCGGGCGGAAGTTCGAGCGTGAGACCGGCCGTCACGTAGGCCACTACATGGCCATCATCCTCGACGACCGCGTGCAGGGCCAGCCGCCGGTCATCAAGAGCCAGATCGGGCAGCGCGGCATTATCGAGCTCGGGTCGAAGCCGTTGCAGGAGGCGCAGGACCTGGCGCTGGTGCTGCGCGCCGGCGCCCTCCCCGCGCCGCTCGCCATCGTCGAGGAGCGCACCATCGGCCCCTCGCTCGGCCAGGACTCGATCAAGGACGGGATCCGCGCCGGCATCGTCGGCGTCGTGCTCGTCGTGCTGATCATGGTGATCTACTACCGGCTGTCGGGAGTGCTCGCGGTGGCGGCGCTCGGCCTGTACGTGCTGTTCACGCTGGCGTGGCTCGCGGGCTTCGGATTCACGCTCACGCTGCCGGGCCTCGCCGGCCTCGTGCTGTCGGTGGGCATCGCGGTGGACGCGAACGTGCTCATCTTCGAGCGCATCCGCGAGGAGCTGCAGCACGGCAAGCTGGTGCGCACCGCCGTGGACGAGGGGTTCAAGCACGCGATGAGCGCCATTATCGACTCGAACGTCAGCACGGCCCTCACCGCCTTCATTCTCTATCTCGTGGGGACGGGCCCGGTGCAGGGCTTCGCCATCACCCTGATCATCGGTATCGCCGCGTCAATGGTCACCGCGATCTTCGTGGTGCGCACCTCCTACATGATCTGGCTGCAGCGCCGGCCCGACATGGCCACCCTGAGCGTCTGA
PROTEIN sequence
Length: 550
MRTIRNRVIVIVGLALLSGWLLLPKDVTQRVRDVATGRMKDTTVRRVPINLGLDLQGGIHLALEVDQSKGPVPDCADAIQRAERVVRSRIDEFGTTEPVVQIQGRCRLIVELAGEKDPARAKSVIQRTAFLEFRITDMNNLFRDALPEIDRALHEAGVQVAGQATGANVAQLFGADTSKGKKGKPAKGKAAKDTTELNAPGALSSLLFQGSLPGEYLVPEEQVPAAESLLARPEVQRLIPRGINLKWGTEVASRGARAYRALYAVEDRPIITGEELEKATARRDPVTNQSVVDFVLSRSGGRKFERETGRHVGHYMAIILDDRVQGQPPVIKSQIGQRGIIELGSKPLQEAQDLALVLRAGALPAPLAIVEERTIGPSLGQDSIKDGIRAGIVGVVLVVLIMVIYYRLSGVLAVAALGLYVLFTLAWLAGFGFTLTLPGLAGLVLSVGIAVDANVLIFERIREELQHGKLVRTAVDEGFKHAMSAIIDSNVSTALTAFILYLVGTGPVQGFAITLIIGIAASMVTAIFVVRTSYMIWLQRRPDMATLSV*