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13_1_40cm_scaffold_8030_7

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: 3987..4544

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=370438 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 190.0
  • Bit_score: 141
  • Evalue 1.60e-30
2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3U3_PELTS similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 190.0
  • Bit_score: 142
  • Evalue 5.00e-31
LigT; 2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 190.0
  • Bit_score: 141
  • Evalue 3.10e-31

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Taxonomy

Pelotomaculum thermopropionicum → Pelotomaculum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 558
TTGAGGCTCTTCGTCGCGCTGAACGTCCCTTCGCAGGTTCGGCAGGCTCTGTGGCAGGTGATGGCGCCGGTGCGCGAGCGCGGGCTACCGGTGAAGTGGGTGCGCCCGGAGGGCATCCACGTGACGCTCAAGTTTCTTGGCGACGTGCCGGACGAGTGCGCTGCGGAGCTCTCCGCCGCTCTGGGACGCGCCGCCGCGGGTGCGCGCGCCCTCGCCCTCGCCCTCGGCGGCTTTGGTGTATTTCCCGATTTCGCGCGCCCACGGGTGATCTGGGTGGGCATCACCGCGGAGCCGGCGCTGGAAATCCTGCAACACCGGGTCGAACAAGAATTCGAGCCGCTCGGCTTTCCCACCGAGGCGCGCCCGTTCCGCCCCCACCTCACGCTCGGTCGCGCGGGCCGGGAGGCCCGGCCGCGCGATTTCACGGGGCTGGAGGCTGCGCTCGGCGCCCTGCAATTCGCGGAGACGCTCGTCATCGAGTCGTTGGATCTGATGCAGAGCACGCTCCAATCCGGTGGTGCGGTGTATCACCTGAGACACAGTGAACGGCTGTCTTAA
PROTEIN sequence
Length: 186
LRLFVALNVPSQVRQALWQVMAPVRERGLPVKWVRPEGIHVTLKFLGDVPDECAAELSAALGRAAAGARALALALGGFGVFPDFARPRVIWVGITAEPALEILQHRVEQEFEPLGFPTEARPFRPHLTLGRAGREARPRDFTGLEAALGALQFAETLVIESLDLMQSTLQSGGAVYHLRHSERLS*