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13_1_40cm_scaffold_2637_22

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: comp(18046..18630)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 185.0
  • Bit_score: 265
  • Evalue 5.40e-68
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 185.0
  • Bit_score: 272
  • Evalue 4.70e-70
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 186.0
  • Bit_score: 266
  • Evalue 5.20e-69

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 585
GTGGTCGCGTGGGCCAAGCAGGGCCACGAAGCTGCGTTCCGGGAGCTCGTGCGACGCTACGAGCGCCCGGTATTCTCGCTGCTCTATCGGATGGTACGCGACCGCGCGCTCGCCGAAGACCTGGCGCAGGAAACGTTCATCAAGGTCCTCAACGGGATCAAGTCCTACAAGCCCGAGTTCAAGTTCTCATCATGGATCTTCAAGATCGCCAACAACGCGGCGATCGATCACATTCGGCGCCGCAGCATCGACACGCTCTCGCTCGACGGCGCGCCCGACGCCCAGACGCCCGAAGCGATGAAGGCCACCGCGATCCAGCTCGACGCGAAGGGCGAGACCCCACTGCAGGAGGTGGAGAACCGGGAGCTGGGCTCCGCGATCGAGCGGGCGATCGGCCGACTGCGGCCTGAGTACCGGGCGTGCATCCTGCTGCGGCACGTAGAGGGGTATTCCTACGAGGAGATCGCGGCAACCCTGGACTTGCCGCTCGGCACCGTGAAGACGTATATCCACCGGGCCCGCAACGAATTGCGAGGCTACCTCGAGGACCGACGCGCTGAAACCCGAGGACGGGACGGCCCGTAG
PROTEIN sequence
Length: 195
VVAWAKQGHEAAFRELVRRYERPVFSLLYRMVRDRALAEDLAQETFIKVLNGIKSYKPEFKFSSWIFKIANNAAIDHIRRRSIDTLSLDGAPDAQTPEAMKATAIQLDAKGETPLQEVENRELGSAIERAIGRLRPEYRACILLRHVEGYSYEEIAATLDLPLGTVKTYIHRARNELRGYLEDRRAETRGRDGP*