ggKbase home page

13_1_20cm_full_scaffold_179854_1

Organism: 13_1_20CM_Gemmatimonadetes_66_74_partial

partial RP 16 / 55 MC: 1 BSCG 15 / 51 ASCG 2 / 38
Location: comp(2..1204)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 409.0
  • Bit_score: 598
  • Evalue 7.80e-168
DNA-directed RNA polymerase subunit beta' n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 409.0
  • Bit_score: 592
  • Evalue 2.30e-166
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 409.0
  • Bit_score: 598
  • Evalue 1.60e-168

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1203
CAGGCGTTCGAGCCGGTGCTGGTGGAAGGCAAGGCGATCCGGATCCATCCGCTCGTGTGCGCGGCGTTCAACGCGGACTTCGACGGCGATCAGATGGCGGTGCACGTGCCGCTCTCGTTCGAGAGCCAGATCGAGTGCCGGTTGCTCATGATCTCGTCCAACAACGTGCTCAAGCCGTCGGACGGCCGGCCCGTGGCCGAGCCGTCGCAGGACATGGTGCTGGGCTGCTATTTCCTCACCAAAGAACCGGCCGACTTCGAGCAGGCAGAGGTCAAGGCCAAGGCGGGGCGGGTGGGCTCGGTGGCGGAGCTCGACATGGGGCTCGCGACCAAGCGGCTGGCGTACCACTCGCCGGTGCACTTCTGGGATGAGACGGGCTGGGTGTACACCACCGCGGGACGGGTGATCTTCCACAGCATCCTTCCCGACGGCATCCGGCGGGAGGGGTTCCTGAATCAGGTGATGCGCAAGCGCGACCTGTCGGAGCTGGTGTTCAACAGCTACCGCCGGGCCGGGCTCGCGAGCACCGTGCAGTTCCTCGACAATCTGAAGGAGTTCGGCTTCCGCTACGCCACCATGGGCGGCGTGTCGATCGGCGTCGAGGACCTGGAGATCCCGGCCGACAAGGCCACGCTGCTGCACGACGCCGAGGGTCGGGTCGAGCGGTTCCAGCGGGCGTACGCCACCGGCCAGATCACCTTCGGCGAGCGCTACAACAAGGTGATCGACGCCTGGACGCACGCCAACAACGACATCGCGGACGCCATGGTGAAGACCATGCAGCGCTCCAAGGGCGGGTTCAACCCGGTGTTCATGATGTTCGACTCCGGGAGCCGCGGCTCGCGCGACCAGATCCGGCAGCTGGCGGGGATGCGCGGGCTGATGGCGAAGCCGCAGAAGAAGCTCACGGGCGGCATCGGCGAGATCATCGAGAGTCCGATCAAGTCGAATTTCCGCGAAGGCCTGTCGGTACTCGAGTACTTCATCTCGACCCACGGCGCGCGCAAGGGTCTGGCGGACACGGCGTTGAAGACCGCGGACGCGGGCTACCTGACGCGCCGCCTGGTGGACGTGGCGCAGGACGTCAGCATCACCGAGGAAGACTGCGGCACCATCCTCGGCCTCGAGATGTCGGCGTTGAAGGAGGGCGAGGACATCATCGAGCCGCTGCGCGAGCGCCTGGTGGGCTGCGTGGCGCTCGAC
PROTEIN sequence
Length: 401
QAFEPVLVEGKAIRIHPLVCAAFNADFDGDQMAVHVPLSFESQIECRLLMISSNNVLKPSDGRPVAEPSQDMVLGCYFLTKEPADFEQAEVKAKAGRVGSVAELDMGLATKRLAYHSPVHFWDETGWVYTTAGRVIFHSILPDGIRREGFLNQVMRKRDLSELVFNSYRRAGLASTVQFLDNLKEFGFRYATMGGVSIGVEDLEIPADKATLLHDAEGRVERFQRAYATGQITFGERYNKVIDAWTHANNDIADAMVKTMQRSKGGFNPVFMMFDSGSRGSRDQIRQLAGMRGLMAKPQKKLTGGIGEIIESPIKSNFREGLSVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVSITEEDCGTILGLEMSALKEGEDIIEPLRERLVGCVALD