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13_1_20cm_full_scaffold_248429_1

Organism: 13_1_20CM_Gemmatimonadetes_69_60_partial

partial RP 18 / 55 BSCG 18 / 51 ASCG 2 / 38
Location: 2..2281

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 730.0
  • Bit_score: 1064
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 733.0
  • Bit_score: 939
  • Evalue 2.50e-270
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 738.0
  • Bit_score: 959
  • Evalue 5.10e-277

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2280
GACTTCATGGACGTGGCGCCCGAGCAGCTCGTGTCGATCGCCGCGGCGCTGATCCCGTTCCTCGAGCACGACGACGCGAACCGCGCGCTCATGGGCTCCAACATGCAGCGGCAGTCGGTGCCGCTCCTCTTCCCGCAGGCCCCGCTCGTGGGGACCGGGCTCGAGGAGACCGTGGCCCGCGACTCGGGCGCCGTGGTGATCGCCCGGCGGGCGGGGGTAGTCACCCGCGTCACCGCCGACGAGATCATCATCGACGCGGGTGAGGAAGAGACGAAGTCCGGCGATCACCCGCTGGCGCGGCTCAAGCAGCACGACCGCTACCGCCTCAAGAAGTTCTGGCGCACCAACCAGGACACGGCCATCAACCAGCGGCCGCTGGTGCAGTTGGACCAGAAGGTGAAGGCCGGTCAGATCGTCGCCGACGGGGCGGGAACCGAGCGGGGCGAGCTGGCGCTGGGGGCGAACGTGCTGGTCGCGTTCATGCCGTGGTACGGGCACAACTTCGAGGACGCGATCGTCCTGTCGGAGCGCCTGGTAAAGGACGACGTGTATTCGTCGATCCATATCCAAGAACTCGAGCTCCACGTGCGCGACACCAAGCGCGGCCGCGAAGAGATCACCCGCGAGATTCCCAACGTGGCCGAGGAGTCGCTCGTCGATCTCGACGAGCGGGGGATCGTGCGCATCGGGGCGCACGTCAAGGCGGGCGACATCCTGGTGGGCAAGATCACGCCCAAGGGCGAAACCGAGCTCAGCCCCGAAGAGAAGCTCCTGACGGCCATCTTCGGCGAGAAGGCGAAGGACGTGAAGGACTCGTCGCTCAAGGTGCCGCCGGGGATGGAGGGCGTGGTCATCGATGTGAAGATCTTCTCGCGCATCGAGGACCAGGTGGTCGAAAAGGACCGCGGCGAGCGCATCGGCGAGGTGCGCCGGCTCGAGGCGGACGAGAAGGCCCGCATCTCCGAGGCGATGTTCGCGGAGCTGCGGGAGCTCCTGGCGGGGCAGGAGGTGGGCCTCATGCTCAAGGCCGGGACGGTGGAGGAGTTCCTGCCGCAGGGGACGAAGCTCGCGCGCCAGCAGCTCGCCGAGATCAACTTCGCGGACGTGGACCTGAAGACGCTGCGGGTCACCAACAAGCCGGTGAACGAGCGGATCCGCGCGGTGCTCGACGCCGCGACGGCCGAGCGCGCCAAGATCGAGGAGAAGTCCGAGGACCAGATCGACAAGATCCTGCAGCCGGACGAGCTCCCCCCGGGCGTGATCCAGCTGGTGAAGGTGTACGTCGCCGAGAAGCGGAAGATCTCGGTGGGCGACAAGATGGCCGGCCGCCACGGGAACAAGGGCATCATCGCGCGTATCGTGCCGGAAGAGGACATGCCGTTCCTCCCCGACGGTTCGCCGGTGGATATCGTCCTCAACCCGCTGGGGGTGCCGTCGCGCATGAACGTGGGCCAGATCCTCGAGACCCACCTCGGCTGGGCGGCGACCATCCTGGGCTTCGAAGCCAAGACGCCCGTGTTCCAGGGCGCGGACGAGACGGAGATCGGCGTGCTGCTCCGCCTGGCGGGGCTCACGTGGGCGGCCGAAGGGCTGCAGCTCGCGACGCGGCCGCCGGAGATCGACCCGGAGATGGTGCGACGCATCGCCGACGACCTGGGGCGGCTCCCGGCCACGAACGGCGGCCGGCCCGACCTCGGCAAGGCGGGGATCGAGCTGCTCGCGAGCCGCGCGCTCGCCCAGGAGACCCGCGACGTGCATCACCAGTTCGTGGACTTCCTGCGCGCCGCCGCGAAGGAGCTGGCCGAGCGCCAGCTCGAGCTGCGGCGGGCGGAGCGCGAGTTCCACCAGGTTCGGCTGGAAGCCGAGGACCTGCCGAAGCCGGAGCAGGCCGCGCTCAAGGCGGGACTCAAGGAGAGCGAAAGGTTCCTCGAGCACGACAAGCCGGCCGAGGTCCTGGAGGCGATGGGGCTGCCGGCGCTCGCCGCGCTGCTCGGGCCCAAGTCCGAAGCGGACGTGGACCAGGCGGCGAACGAGCTCCTCAAGGCGGCCGGGCTCACCCCGACGGGGAAGGCGCGGCTGCGCGACGGCCGCTCGGGCGAGTTCTTCTCGTCCGACGTGACCGTCGGCTCGATCTACATGATGAAGCTGTCGCACCTGACTCGCTGGTCACGCAGCAGCCGCTCGCCGGCAAGGCGCAGTTCGGCGGCCAGCGGTTCGGCGAGATGGAGGTGTGGGCGTTGGAAGCCTACGGGGCGGCGCACACGCTGCAGGAGATCCTGA
PROTEIN sequence
Length: 760
DFMDVAPEQLVSIAAALIPFLEHDDANRALMGSNMQRQSVPLLFPQAPLVGTGLEETVARDSGAVVIARRAGVVTRVTADEIIIDAGEEETKSGDHPLARLKQHDRYRLKKFWRTNQDTAINQRPLVQLDQKVKAGQIVADGAGTERGELALGANVLVAFMPWYGHNFEDAIVLSERLVKDDVYSSIHIQELELHVRDTKRGREEITREIPNVAEESLVDLDERGIVRIGAHVKAGDILVGKITPKGETELSPEEKLLTAIFGEKAKDVKDSSLKVPPGMEGVVIDVKIFSRIEDQVVEKDRGERIGEVRRLEADEKARISEAMFAELRELLAGQEVGLMLKAGTVEEFLPQGTKLARQQLAEINFADVDLKTLRVTNKPVNERIRAVLDAATAERAKIEEKSEDQIDKILQPDELPPGVIQLVKVYVAEKRKISVGDKMAGRHGNKGIIARIVPEEDMPFLPDGSPVDIVLNPLGVPSRMNVGQILETHLGWAATILGFEAKTPVFQGADETEIGVLLRLAGLTWAAEGLQLATRPPEIDPEMVRRIADDLGRLPATNGGRPDLGKAGIELLASRALAQETRDVHHQFVDFLRAAAKELAERQLELRRAEREFHQVRLEAEDLPKPEQAALKAGLKESERFLEHDKPAEVLEAMGLPALAALLGPKSEADVDQAANELLKAAGLTPTGKARLRDGRSGEFFSSDVTVGSIYMMKLSHLTRWSRSSRSPARRSSAASGSARWRCGRWKPTGRRTRCRRS*