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13_1_20cm_full_scaffold_657_5

Organism: 13_1_20CM_Gemmatimonadetes_69_60_partial

partial RP 18 / 55 BSCG 18 / 51 ASCG 2 / 38
Location: comp(3391..4404)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 331.0
  • Bit_score: 354
  • Evalue 1.60e-94
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 324.0
  • Bit_score: 270
  • Evalue 8.20e-70
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A885_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 324.0
  • Bit_score: 270
  • Evalue 2.90e-69

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1014
ATGGCCGCCGTCACGTTCTGCGTCGTCGTCCCCGAGACCGAGCGTCTCGACCGCTTCCTCGCCGATCAGCTCGCCCTGTCCCGCACCGTCGCCGCCCGTCTCATCGCCGACAAGCACGTCACGCGCGACGGCCGCCCGCTGCGCCCCTCCGCCCTGCTCGAGCGCGGGGCCGTGGTGACGGTGGAGCTGCCGCCCGACGCGCCGGCCCCGTCGAGCTACGCTCCCGCCCACCGCGACCTCACCTTTGCCTACGAAGACGAGCACCTCGCGGTGCTCGACAAGCCCGCCGGGCTGGTGGTTCATCCCGGTCCCGGTCACTGGGACGACACGCTCGTCAACGTGCTGGTCGGGCGGGGCACGGCGCTGGCGCAGGGAGCCACCGAGGGACGGCCCGGCATCGTGCACCGCCTCGACCGCGACACGTCGGGGCTGTTGCTCGTCGCCAAGACCGACACGGCGCACCGCCGCCTCGCGCGCATGATCGAGCGGCGCGAGGTCGAGCGGGTGTACGCGGCGCTCGCGTGGGGTCACTTCGCGAACAGTCCGGTGGACATCGAGGCGCCCATCACGCGTCACCCCAAGGATCGCAAGCGGATGACGGTGCTCGCGGGCGGACGCCACGCCGTCACGCACGTGCGTGTGATCGCGCGCTTCGCTCACGTCGACCTGGCGCGGCTCACACTCGGGACCGGGCGCACGCACCAGATCCGCGTGCACCTGGCGCACGTAGGACACCCCGTCGTGGGCGACCGCGAATACGCGTTCGGCGGCAGCCGCCGCGTCACGCCGTCGTCGCGCCAGGCGGCGGAGCGCCTCGAAGCGCTCGCGCCGCGCCAGCTGCTGCACGCGACGTTGCTCGCGCTGGTCCACCCGGTGACCGGCGCGCGGCTCGTGCTCCGCTCGGAGTGGCCGCCCGACTTGCTGCCGGCGCTGGCCGACGCGGCCGCCGATGCGACTTTGCTTGCTCAACGCAACCCCTTGCAGTATCTTGGCTTCTTCGCTTCGGATGAGTGA
PROTEIN sequence
Length: 338
MAAVTFCVVVPETERLDRFLADQLALSRTVAARLIADKHVTRDGRPLRPSALLERGAVVTVELPPDAPAPSSYAPAHRDLTFAYEDEHLAVLDKPAGLVVHPGPGHWDDTLVNVLVGRGTALAQGATEGRPGIVHRLDRDTSGLLLVAKTDTAHRRLARMIERREVERVYAALAWGHFANSPVDIEAPITRHPKDRKRMTVLAGGRHAVTHVRVIARFAHVDLARLTLGTGRTHQIRVHLAHVGHPVVGDREYAFGGSRRVTPSSRQAAERLEALAPRQLLHATLLALVHPVTGARLVLRSEWPPDLLPALADAAADATLLAQRNPLQYLGFFASDE*