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scnpilot_solids1_trim150_scaffold_2316_curated_4

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 3416..4303

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZCC1_9NEIS similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 285.0
  • Bit_score: 227
  • Evalue 1.90e-56
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KGP95516.1}; TaxID=1238 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Piscirickettsia.;" source="Piscirickettsia salmonis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 279.0
  • Bit_score: 227
  • Evalue 2.70e-56
DNA-binding transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 289.0
  • Bit_score: 220
  • Evalue 7.30e-55

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Taxonomy

Piscirickettsia salmonis → Piscirickettsia → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGACCATAACCTTGCGCCAACTCGAGATCTTTCTCGCCCTCGCCGAGCACGAGCACGTAGTGCGAGCATCGGAAGCGGTGAACCTGTCGCCGTCGGCGACGAGTTCGGCGCTTCTGGCTCTGGAAGCAGCCGTCGGACGACCGTTGTTCGATCGCAGCGGACGCGGCCTCCGACTCAACGCCGACGGTCGACGCTTCCGCGGCGCCGCCCGCGCCACCCTCACTCAGGCCCACGAAGCCGAATCGCTACTGCGCGACGAGGAGAGCGGCCAACTGGTGGTGGGCGCCTCCACGACGATCGCAAATCACGTACTCGCGCCGGTCCTGGCGACGTTTATCGCGTCACATCCGTCGGCGGTGCTGAGGCTCGAGATTGGCAACACACGCGACATCCTGGACCGTCTGCTCGACTTCGCGATCGACCTCGCATACGTGGAAGGCCCCACCGCTCATCCTGATATCCTGGCCACACCGTGGCGGGCCGATCGACTGGTGGTCTTCGTGGCATCCAACCATCCACTGACCCGGAGCGGACGGATCGAGCTCAGCGACCTATCGGAGGTGGTATGGGTACTCAGGGAGGAGGGCTCGGGTACGCGCGAGGTATTCATGCGAGCGCTGGGTGACGATGCCGCCCGGCTCTCAACGGTGCTGGAGCTGGGAAGCAGCGAGGCCGTAGCGCGCGCAGTGGAAGCCGGCGGCGGTGTGGGGTGCCTCTCCCATCTGGTGGTTCGCCGCGACCTCGAGGAGGGCAGGCTGACCGAGTTGGCCACGCCGGCCTGGAAGCTCAGGAGAACGATGTGGCGGCTGACACACCGGCACCTCCCGGTCAGTCGCCTGGCCAGCGCCTTCGCCGCCACCCTTCCAGCGGAAACGGAGCCGGCGTAA
PROTEIN sequence
Length: 296
MTITLRQLEIFLALAEHEHVVRASEAVNLSPSATSSALLALEAAVGRPLFDRSGRGLRLNADGRRFRGAARATLTQAHEAESLLRDEESGQLVVGASTTIANHVLAPVLATFIASHPSAVLRLEIGNTRDILDRLLDFAIDLAYVEGPTAHPDILATPWRADRLVVFVASNHPLTRSGRIELSDLSEVVWVLREEGSGTREVFMRALGDDAARLSTVLELGSSEAVARAVEAGGGVGCLSHLVVRRDLEEGRLTELATPAWKLRRTMWRLTHRHLPVSRLASAFAATLPAETEPA*