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scnpilot_solids1_trim150_scaffold_10515_curated_3

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 1496..2071

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 187.0
  • Bit_score: 145
  • Evalue 1.90e-32
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 187.0
  • Bit_score: 145
  • Evalue 8.60e-32
2'-5' RNA ligase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CUU4_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 187.0
  • Bit_score: 145
  • Evalue 6.10e-32

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Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 576
ATGCGGCTCTTCGTCGCCCTGAATCTGCCGGACGACGTCCGTGCCCGTATCGACCAGGAATTGCTCCAGCCTCTCCGCGAGGCCACGCGTGGCGTTCGTTGGGTTCTTCCCGACATGCTGCACGTCACACTGGCCTTCCTGGGCGAACGCTCGGAGGTGGAGGCCAGGGAGGCCTCGCGCGTGGTGGCGGAACTGGCCCATGGACGCTCGCCGCTCCACGTGACATTGCGCGGACTGGGCGCCTTCCCGTCCGTTGAGAAGCCGCGGGTGGTCTGGCTGGGGCTGGAGGATCCAACCGGGGTTCGCCAACTGCATCGGGCCTTCGAGCGCGAGAGAGCCCGGCTTGGCGTGCCGGCAGAGGGGCGCGCATATCACCCACACGTCACGCTGGGGCGCGTACCGGGTGAATCGCCCACCTTGCGCGAGGCACTCGCGCCGGAGCGCCCCGTGCACGAGTTTCAGGCGGAAGTGACGCTCAAATCGGTGGACCTGATGCGCAGCGAGAATTCCTCCAATGGGCTGACCTACACGGTCATCACCACCGCCCCATTCGTCTCCTCCACGGAAGCCCGTTGA
PROTEIN sequence
Length: 192
MRLFVALNLPDDVRARIDQELLQPLREATRGVRWVLPDMLHVTLAFLGERSEVEAREASRVVAELAHGRSPLHVTLRGLGAFPSVEKPRVVWLGLEDPTGVRQLHRAFERERARLGVPAEGRAYHPHVTLGRVPGESPTLREALAPERPVHEFQAEVTLKSVDLMRSENSSNGLTYTVITTAPFVSSTEAR*