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PLM4_65_b1_redo_sep16_scaffold_25019_6

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: comp(3190..4080)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 291.0
  • Bit_score: 470
  • Evalue 7.50e-130
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 291.0
  • Bit_score: 471
  • Evalue 1.60e-130
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 298.0
  • Bit_score: 528
  • Evalue 3.30e-147

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 891
ATGGCCAATCCTCCGCGCAAGAAACGCCGTCGCCGCGCCGCACCGCTGATCGCGGTCAACGAAGACGACCGGGACCTCCTCGACCAGTACCTCTACGAGGTGAGCAAAACGCCCCTCCTCAAGCCGGACGAGGAGATCGCGCTTGCCCGCAAGGTACGGGCCGGAGACCAGGAGGCCATGCAGGAGCTCGCCAAGCGCAACCTGCGCTTCGTGATCTCGGTCGCCAAGAAGTACCAGAACCGCGGTCTGCCCCTCACCGATCTCATCGGGGAGGGGAACGTCGGGTTGCTCACCGCCGCGCGGAAGTTCGACCCGGACCAGGGTGTAAAGTTCATTTCCTACGCGGTGTGGTGGATCCGGCAGGCCATTCTGGCGTCCCTGGCGCGGCACGGGCGCACCGTGCGGGTGCCGCTCAACCGGACGGCGGACCTCTCGAAGATCGTCCGCACGGCGGAGGCCCTGCGCCAGGAACTGCGCCGCGAGCCCACCCCGGAGGAGATCGCCGAGGCCACCGCCCTGTCGCTGGAGGTGGTGCAGTCGCTGGCCGCCCTCAACACCGGCGAGGTCCGGCTCGACGCCCCGCTGGATCCCGACGGCGATCGCGCGCTCATCGAGCGGTTCATCGCCGAGGATCTGCCGGACACGGAAGAGAAGACCATGGAGCGGTTCCTGAGCGACGAAGTCGAGAGCGCGCTCCGGTCCCTCCCCGCCCGGGACGCCAAGGTGCTCCGCCTGTACTTCGGGCTGGACGGCGGGCGCGAGCACACGCTCGAGGAAATCGGTGGCATGCTGGGCGTCACCCGCGAGCGGGTACGCCAGCTGCGCGACCGCGCCCTCAAACGGCTGCGCGAGGGTGACGTCGGGAAGGCGCTGGCCAGCTTCGCGGCCTGA
PROTEIN sequence
Length: 297
MANPPRKKRRRRAAPLIAVNEDDRDLLDQYLYEVSKTPLLKPDEEIALARKVRAGDQEAMQELAKRNLRFVISVAKKYQNRGLPLTDLIGEGNVGLLTAARKFDPDQGVKFISYAVWWIRQAILASLARHGRTVRVPLNRTADLSKIVRTAEALRQELRREPTPEEIAEATALSLEVVQSLAALNTGEVRLDAPLDPDGDRALIERFIAEDLPDTEEKTMERFLSDEVESALRSLPARDAKVLRLYFGLDGGREHTLEEIGGMLGVTRERVRQLRDRALKRLREGDVGKALASFAA*