ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_84239_1

Organism: PLM4_65_b1_sep16_Gemmatimonadetes_71_15

near complete RP 45 / 55 MC: 1 BSCG 42 / 51 ASCG 12 / 38
Location: 3..2858

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 2 sugar binding protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EA25_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 958.0
  • Bit_score: 1035
  • Evalue 0.0
Glycoside hydrolase family 2 sugar binding protein {ECO:0000313|EMBL:AHG91996.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 929.0
  • Bit_score: 1436
  • Evalue 0.0
glycoside hydrolase family 2 sugar binding protein similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 929.0
  • Bit_score: 1436
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2856
CGGGTGTACCGGGCTTGCCCCGCGCCTTCCACCAGCGACAGCATTGACGCTATGAACCGCACGTCACTGGCTTGCCTCACGCTGCTGGCCGGCGTCCTCCGGGCCCAGACCCCCGAGTCCCCCATCCCGCTCCCCGAGCATCCCCGTCCCGATTTCGAACGCGCCGAGTGGCTGAACCTGAACGGCCGCTGGCGCTTCGCCTTCGATCCGGGGAACCATGGCGTGGACGCGGGCTGGCCCAGCGGCGCCCTGCCCGGCACGCGCGAGATCGTGGTGCCGTTTTCGTGGGGCGCACCCCTCTCGGGCGTGGCCGACAGCGCCGACATCGGCTGGTACGGCCGCTCCATCACGATCCCGGAAGCCTGGCGGGGTCGCCGAGTCTTTCTGGTGTTCGGCGCCTCGGACTGGCACACCATGGTCTGGCTCGACGGTCGCCCACTGGGCGAGCACCAGGGCGGATACACGCCGTTCTCGCTCGAGCTGACCGACGCCGCCACCCCCGGACGGCCCCAGCGGCTCGTGATACGGGCGGACGACTCCGACCATCCCTTCAAGCTCGAGGGCAAACAGGGCTACGGCAAAGCCCGCGGCATGTGGCAGACCGTGTATCTCGAAGCCCGGGGCGCGGAGCCGCTCGCCGCGGTGCACTTCACGCCCCGCGCCGACCTGGCCGGCGTGGGCGTGGACCTGCGGCTCCTGGAGCCGGCGTCGCAGAACCTCCCGTTCCGGCTCAGGTTCACCAACGCTCCGGGCCGCCCCAGCATGACGGGCACCATCGCCCGCGGCGCCACCACCGCGCACGTGGACGCCTCGCTCCCGAGCGCTCGGCCCTGGGCGCCGGACGATCCGTTCCTGCACGAGGTCGAGGTGACCGTGGGCGCGGAGGGGCCGGCGCAGGACCGGGTCCGGACGTACTTCGGCATGAGGACCATATCGGCGGTGAATCTCCCCGGCACCGACTACCCCTACGTCGCCATCAACGGCACGCCGCTTTTCCTCCAACTCGCCCTGGACCAGGCCTACCATCCCGAGGGCTACTACACCTTCCCGACCGACAGCGCGCTCAAGCAGGAGATCCTGCTCGCTCGGCAAATCGGGCTCAACGGGCTCCGCGAGCACGTCAAGATCGAATCACCCCGGAAGCTCTACTGGGCCGACCGGCTGGGCGTGCTGATCATGGCCGACGTGCCCAACTGGTGGGGACCGCCGGATTCCGCCGCGTTCCAGGAGCACGAGGCCGCCCTCCGGGGCATGATAGACCGGGACTTCAACCATCCGGCCGTGTTCTCGTGGGTGCTGTTCAACGAGACCTGGGGCCTGTACTCCAAAGTGGGCGACCGCGACCGCTACTTGCCCGAAGCCCAGCGCAAGGTGGTGAACCTCTACCGGCTGGCGAAGTCCCTCGACCCGACCCGCCTGGTCGAAGACAACTCGCCCTGCTGCCGCCGGGGTCACACCGAGACCGACTTGAACTCGTGGCACGACTACCTGCCCGGCTGGCGCTGGGACGAGCGCCTCCGCCGCGTGAGCGACAGCACCTTCCCGGGCTCCACCTGGAACTTCGAGACGGGCTTCCGCCAAGGCCGCGAGCCGATGCTCAACTCCGAGTTCGGGAACGTGTGGGGCTACGAGGGCAGCACTGGAGACGTGGATTGGAGCTGGGACTACCACCGCGCGGTGGACGCCTTTCGCCGGAGCCCGAAGCTCGCGGGCTGGCTCTACACCGAGCACCACGACGTCATCAACGAGTGGAACGGCTACTGGCGCGCCGACCGCTCCTGGAAAGAGACCGGCTTGGGAGCCCTGGTCGAGGGGATGACGCTGCGCGACCTGCACTCGCCACTCTACGTCGCCGTGGGCCATCCGGCCTTGAGCCGAGCGGCGCAGCCGGGAGAGAAGGTATCGGTGCCGCTCTACGCCTCGTTCCTGACCGGCAGCACCGCCTTGGGCGACTCGCTCACGCTGCTGGCCGACCTGGTCGGCTGGAACGCGTTGGGCGAGCGGAAGAGCTACGGCACCTATCGATCGCGGATCCCGTACCGGCCGTGGATGTCTGAGCCGCTGATGACCCAGACGCCGCTGATAGTCACCATGCCGGAGGAACGGTCGGTTGCGGTGTTGGGCGTGAAGCTCGCAGATCAATCGGGTACCGTGCTGGCGCGGAACTTCACTACGTTCGTGATTGATGCTCCCGTTCCCGCCACCTCCACGCTGGCCGACGGCCGCCGAGTGCGGGTGGCGACGGTGCCGGCGACGCGGGTAGCGGATGCGGGGTGGTCGCTCAAGCAGTGGACGGTGTTAGGCGACCACAAGATGAACGGCGCAGGTGCCGGCTTCTTCGAGTACCGCATCCCCTGGCCGGAAGGACTGGACCCGAACGCCGTCGCCGGCGCCACCTTCCTGGTCGAGGCCTCGGCCAAAAGACTCAACGGCAAGGACCGCGACTCCACGGCGGCGGGCGGCGGCGACTACATGCGGGGCGGCGGCTTCCACGACCGGAGCCGGAACCCCAACAGCTACCCCATGACCAGCGAATCGAAGTTCGAGAGCGCGGTCACCGTCCGGGTGAACGGCCACCTGGCCGGCCGCTGGGAGCTGGCCGACGATCCGGCCGACTCGCGCGGCATCCTGAGCTGGCACGCCCAGCCGCGGGACGGCCGGCTCCACGAGGCCGGATCGTACGGCGAGCTGCTGCGCGTGCCGGTGCCGGCCGACGCCTTGGCCCAGGCGGCCAGGGACCGCGCGGTGATGATTCGGCTGGAGGTGGATGAGGCGCTGCCCGGGGGACTGGCCATCTACGGCGGCCACTTCGGCCGCTTTCCCGTAGATCCGACCGTCCTGTTCGTGCTGCGGTAG
PROTEIN sequence
Length: 952
RVYRACPAPSTSDSIDAMNRTSLACLTLLAGVLRAQTPESPIPLPEHPRPDFERAEWLNLNGRWRFAFDPGNHGVDAGWPSGALPGTREIVVPFSWGAPLSGVADSADIGWYGRSITIPEAWRGRRVFLVFGASDWHTMVWLDGRPLGEHQGGYTPFSLELTDAATPGRPQRLVIRADDSDHPFKLEGKQGYGKARGMWQTVYLEARGAEPLAAVHFTPRADLAGVGVDLRLLEPASQNLPFRLRFTNAPGRPSMTGTIARGATTAHVDASLPSARPWAPDDPFLHEVEVTVGAEGPAQDRVRTYFGMRTISAVNLPGTDYPYVAINGTPLFLQLALDQAYHPEGYYTFPTDSALKQEILLARQIGLNGLREHVKIESPRKLYWADRLGVLIMADVPNWWGPPDSAAFQEHEAALRGMIDRDFNHPAVFSWVLFNETWGLYSKVGDRDRYLPEAQRKVVNLYRLAKSLDPTRLVEDNSPCCRRGHTETDLNSWHDYLPGWRWDERLRRVSDSTFPGSTWNFETGFRQGREPMLNSEFGNVWGYEGSTGDVDWSWDYHRAVDAFRRSPKLAGWLYTEHHDVINEWNGYWRADRSWKETGLGALVEGMTLRDLHSPLYVAVGHPALSRAAQPGEKVSVPLYASFLTGSTALGDSLTLLADLVGWNALGERKSYGTYRSRIPYRPWMSEPLMTQTPLIVTMPEERSVAVLGVKLADQSGTVLARNFTTFVIDAPVPATSTLADGRRVRVATVPATRVADAGWSLKQWTVLGDHKMNGAGAGFFEYRIPWPEGLDPNAVAGATFLVEASAKRLNGKDRDSTAAGGGDYMRGGGFHDRSRNPNSYPMTSESKFESAVTVRVNGHLAGRWELADDPADSRGILSWHAQPRDGRLHEAGSYGELLRVPVPADALAQAARDRAVMIRLEVDEALPGGLAIYGGHFGRFPVDPTVLFVLR*