ggKbase home page

PLM4_32_b1_sep16_scaffold_400_5

Organism: PLM4_32_b1_sep16_Gemmatimonadetes_67_8

near complete RP 42 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: comp(2600..3427)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 280.0
  • Bit_score: 193
  • Evalue 1.60e-46
Diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 274.0
  • Bit_score: 200
  • Evalue 3.80e-49
Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 266.0
  • Bit_score: 245
  • Evalue 6.70e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 828
ATGAGCCGAGCTTTCTACAAGATGACCGGTTCCGGAAACGATTTCGTTTTTCTCGACGGCCGTGCCAGCTCGGTCTCCGATTGGCCCGCCGCGGCCATCGCGGCGATTTGCGACCGGAGAACCGGGGTAGGGGGTGACGGCCTCGTCATCGCCACTCCGGAGGGGCTGGACGGCGTCCGGATGGTGTATTTCAATGCGGACGGTTCCCGGGCCGGGATGTGCGGCAATGCCGCCCTCTGTACCACCCGACTCGCCGCCCGGCTCGGTATGGCACCGGGTTCCGGAATGCGGGTCCACACCGATACCGGCGTGCTCGAGACGCGTTGCGTGGGCCCAAGCTGGGGGGCTGAGCTGCTCCTGCCGGATTTCGGCCTGCCGGAAGATGTAGGGCTCGAGCGAAGGCCCGGAGAGCGGTGGATGGCGCGGTGCACCGTGGGGGTGCCCCACGTAATCATCCTGGTCGACGACGTCACATCGGTGGACGTAGCCGCGAGGGGCCGGGAACTCCGGCTTGCGGCGGCCTTCGCTCCCGACGGAGTCAACGTGAACTTCGTGGGCCGTGGACCGAGCAACCCAGACGCTTCCTGGCGGCTCAGGACCTACGAACGGGGGGTCGAAGGGGAAACACTGGCCTGCGGTACCGGAACCGTGGCGGCTGCCTTTGCCCTAGCCGCCCGAGGCTTGGAGAGCCTTCCGGTACAAATTGCTTCCTGGGGTGGCAACATCTTCTCAGTGGCGGGCCGCATCGACGCCCGGTGGGCCCGGGAACCATGGCTGTGCGGGGAAGGGCGGCTGGTCTTCGAGGGCACCTACCCGGTAATGGACTGA
PROTEIN sequence
Length: 276
MSRAFYKMTGSGNDFVFLDGRASSVSDWPAAAIAAICDRRTGVGGDGLVIATPEGLDGVRMVYFNADGSRAGMCGNAALCTTRLAARLGMAPGSGMRVHTDTGVLETRCVGPSWGAELLLPDFGLPEDVGLERRPGERWMARCTVGVPHVIILVDDVTSVDVAARGRELRLAAAFAPDGVNVNFVGRGPSNPDASWRLRTYERGVEGETLACGTGTVAAAFALAARGLESLPVQIASWGGNIFSVAGRIDARWAREPWLCGEGRLVFEGTYPVMD*