ggKbase home page

PLM4_32_b1_sep16_scaffold_1372_20

Organism: PLM4_32_b1_sep16_Gemmatimonadetes_67_8

near complete RP 42 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: comp(24066..24548)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent outer membrane transport protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 148.0
  • Bit_score: 119
  • Evalue 2.30e-24
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 146.0
  • Bit_score: 125
  • Evalue 1.20e-26
TonB-dependent receptor {ECO:0000313|EMBL:AHG89427.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 146.0
  • Bit_score: 125
  • Evalue 5.90e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 483
ATGCCTTTCGGACCCACGACCGCCCGAAACTACCTCCTCCGGGCCCTGTTCCCGGTTGCATTAGCCATGCTGGGCAGCGTGCCGGCAGCGGCCCAGGGTCAGACCGGCAAGATCGTGGGGAAGGTGGTGGACGGAGATGCCGCCGTTCCCCTGGCCGGCGCCCGTGTGGTAGTGGTGGGAACGACGCTCTCGACCCTCACCAAGGTCGATGGCCGATTTGCCCTGTCCAACGTACCCGCGGGAACCGTGACTCTTCGGGTCGCGATGATCGGCTACGGACCGAAATCGGTCACCGATGTCGTTGTGAAAGCCGGTGACGTGACCACCCAGGACATCTCGCTCGGGGGGCAGGCCACCCAGCTCGAGGAGCTGAGCGTCATGGCCCAGGTCGAGCAGGGGTCGGTCAACTCGGCCCTGGACGAGCAGCGCTACAGTGTCGCGATCGTCAACGCCATCTCCGCCGAGCAGATCGCCGCATGTTGA
PROTEIN sequence
Length: 161
MPFGPTTARNYLLRALFPVALAMLGSVPAAAQGQTGKIVGKVVDGDAAVPLAGARVVVVGTTLSTLTKVDGRFALSNVPAGTVTLRVAMIGYGPKSVTDVVVKAGDVTTQDISLGGQATQLEELSVMAQVEQGSVNSALDEQRYSVAIVNAISAEQIAAC*