ggKbase home page

PLM4_32_b1_sep16_scaffold_10252_10

Organism: PLM4_32_b1_sep16_Gemmatimonadetes_67_8

near complete RP 42 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: comp(7508..9010)

Top 3 Functional Annotations

Value Algorithm Source
2',3'-cyclic-nucleotide 2'-phosphodiesterase; K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 487.0
  • Bit_score: 255
  • Evalue 1.10e-64
5'-Nucleotidase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 417.0
  • Bit_score: 302
  • Evalue 1.70e-79
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 455.0
  • Bit_score: 413
  • Evalue 3.40e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1503
ATGCTCTTCGAAAGCCTGCTGGTGGCGGGCCTGGCCGCCGGCGCGGATTCCACGCTGCTCCGCATTCTCGCGACCAACGACTTTCATGGCGCCCTCGACGCGCGGGTGTACGGCTGGTCCAACGGGCGGCCGGTCGGGGGTGCCGCCGCGCTCAAAGCCACACTAGACAGCGCGGCGGTGGGCTGCCGCTGTCCGGTGCTCCGGCTCGACGGCGGCGACCAGATGCAGGGCTCCCTCGGCTCCAACCTGGTGTACGGCCGCTCGGTAGTCGAAGTCATGAACGCCGTCGGCCTCGACGCCGCGGTGGTGGGGAACCACGAGCTCGATTGGGGCGTGGACACCCTGCGTGCCCGCATGGGGGAGGCGAAGTATCCCTGGCTCGCCGCGAACGTCTTCGACTCGCTCACGGGAAAGCGGCCCGGCTGGGCCGTTCCCTATACGATCCTCACCCGGGGCCGTCTTCGCATCGGCGTGGTGGGCTACATGGCCCAGCGAACCAAGGCGATGGTGAGCGCCGGGGCGGCCAAGGGGCTGATATGGAAGCGTGGCCCTGACGCCATCGGCGACGTGCTGGCCGCGGTGCGGGCGGAGCGGCCCGACCTCACGATCCTGGTGGCCCACGAAGGCGCCTTCTGCGATTCGTTGCCCTGCGCCGGGGAGATCGTCGACCTGGCGCGCGGCCTCGACTCCACCATAGTGCAGCTGATCGTCTCCGGCCACACCCACTCCCTGGTCCACACCGTCGTCAACGGCATTCCGATCGTTCAGGCGCGCAGTAATGGCACCGCCTATGGCGTCGCGGACCTGGTGCGCCGGGACGACGGCTCCCGGGCCTGGAAGGTCAGGGTGGAGACGGTCTGGGCCGACCGGGTCACCCCCGACAGCGGGATCACCGCGATCGTGGCGCGCTACCGGCCGATGGTGGACCGGATCGCCGGCCAGCCGGTTGCCGAGCTCCGCGATCCGCTGACCCGGGACGGGCAGCAATATCCGCTCGGCAACCTGATCGCGGACGCGCAGCGCGCGGCGGCACCGGGAACCGATTTTGCCCTGATGAACAACGGCGGGATCCGCCGGGACCTTCGCGCCGGCCAGATCACCTACAGCGACCTCTTCGAGCTGCAGCCGTTCGCCAACAACATCACCCAGGTCTGGATCACCGGATCGCAGCTGCACGACCTGCTGGAGTTTGCGGTGGGCGGCGGAGCGCCCCGCTTCCATCTCTCCGGCCTGGCAGTGCGCTACGACCTCGCCAAGCCCCGGGGCAGCCGGATCGTCTCGATGCGCAGCGCCTCGGGCGCGCCCATCCAGCCGGCCCGAACCTATGTACTGGCGCTGAGCGACTTCCTTCAGGAGGGCGGGGAAGGGCTGAACCTGTTGCGTACCCTCCCCTCGCACCGAACCGGCAAGACCGATCTCGAAGCCTTGATCGCCTATCTCAAGGCCATGCCCCAGCCCGTTACGCCACCTCGTGACGTGCGTTTCGCGCCGGTGAGCCCGTGA
PROTEIN sequence
Length: 501
MLFESLLVAGLAAGADSTLLRILATNDFHGALDARVYGWSNGRPVGGAAALKATLDSAAVGCRCPVLRLDGGDQMQGSLGSNLVYGRSVVEVMNAVGLDAAVVGNHELDWGVDTLRARMGEAKYPWLAANVFDSLTGKRPGWAVPYTILTRGRLRIGVVGYMAQRTKAMVSAGAAKGLIWKRGPDAIGDVLAAVRAERPDLTILVAHEGAFCDSLPCAGEIVDLARGLDSTIVQLIVSGHTHSLVHTVVNGIPIVQARSNGTAYGVADLVRRDDGSRAWKVRVETVWADRVTPDSGITAIVARYRPMVDRIAGQPVAELRDPLTRDGQQYPLGNLIADAQRAAAPGTDFALMNNGGIRRDLRAGQITYSDLFELQPFANNITQVWITGSQLHDLLEFAVGGGAPRFHLSGLAVRYDLAKPRGSRIVSMRSASGAPIQPARTYVLALSDFLQEGGEGLNLLRTLPSHRTGKTDLEALIAYLKAMPQPVTPPRDVRFAPVSP*