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PLM0_60_b1_sep16_scaffold_375_22

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 18803..19579

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 257.0
  • Bit_score: 348
  • Evalue 5.30e-93
tRNA pseudouridine synthase A Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 257.0
  • Bit_score: 300
  • Evalue 9.00e-79
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 257.0
  • Bit_score: 348
  • Evalue 1.10e-93

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 777
ATGCTGTCGCGTTCCGTGCAACTCGTGTTGCACTACGATGGCGCGCGCTTTTCCGGCTGGCAGCGGCAGCCTCGCGAACGGACGGTTCAGGGAGTCCTCGAAGCGGCGGTGTCCAAATTGTGCGGAACGTCTCTCGCCATCGTGGGCGCCGGGCGGACCGATGCGGGAGTTCACGCGCGCGGCCAGGCCGCCGGAGTGCGCGTGCCTGAGAAATGGAGCGCGCTCGCTCTCCGACGATCGATGAACGCCATTCTACCGGACGATGTATGGATTGCGGCAGCCTTCGAAATGCGTGATGAGTTCCATCCGCGCTACAGCGCGGTTTCTCGCAGCTACAGCTACTATGTAGGCACAGACGATCTCGCATCTTCCCCGTTTCGCCGGACACAGGAACTGGTCTGGAAAAAACCTGCCGATCTCGCACGAATGGCTGTTGCGGCTGAAGCAATCCGCGGCGAGCACTCCTTTCGTGCTTTTGCGGTGAAAGGGACCGCGCCCGAGCGTGATGACCACCGTTGCACCGTGTTCCACGCCGCCTGGAGGGAGCGCGAGGGGGGACTCGCATTCGATATTCGGGCCGACCGGTTCCTCCATCACATGGTCCGATTCCTCGTCGGTACGATGCTCGACATCGGCGAAGGACGGCGCGACCCGGGTGTGATGGCGGAACTCCTCGCCCAGGATGACAACAGCAAAGTCTCTCAGCCTGCTCCCTCCCACGCTCTATTTCTCGAGCGTGTGGATTATCCGAAAGACCTCTACCTGGAAACCGCATGA
PROTEIN sequence
Length: 259
MLSRSVQLVLHYDGARFSGWQRQPRERTVQGVLEAAVSKLCGTSLAIVGAGRTDAGVHARGQAAGVRVPEKWSALALRRSMNAILPDDVWIAAAFEMRDEFHPRYSAVSRSYSYYVGTDDLASSPFRRTQELVWKKPADLARMAVAAEAIRGEHSFRAFAVKGTAPERDDHRCTVFHAAWREREGGLAFDIRADRFLHHMVRFLVGTMLDIGEGRRDPGVMAELLAQDDNSKVSQPAPSHALFLERVDYPKDLYLETA*