ggKbase home page

PLM0_60_b1_sep16_scaffold_960_6

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(5444..5812)

Top 3 Functional Annotations

Value Algorithm Source
Competence protein ComEA helix-hairpin-helix repeat region Tax=Fretibacterium fastidiosum RepID=D4MAL7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 58.0
  • Bit_score: 53
  • Evalue 9.00e-05
Helix-hairpin-helix DNA-binding class 1 similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 133.0
  • Bit_score: 88
  • Evalue 1.20e-15
Helix-hairpin-helix DNA-binding class 1 {ECO:0000313|EMBL:AHG91696.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 133.0
  • Bit_score: 88
  • Evalue 6.10e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 369
ATGCCGACCCCTGCCGAACGCAAAGCGCTGCTCTTTTTCTCCGTCGTGCTCGTGCTCGGCGCATCGAATCGCGCCTATCGGACGCTCCAGAGCCGCTCTCCCGTCGACGCTGGCGCTCGATCGGCGCTTGAGAGGCAGATCAAAGCCGCCGACTCTGCCCGCCGTTCGGGACTTCGCAAGCCAAAACGGGAAAGGAAGCTAAAACCCCCGCCGAAGCCAGCCGGACCAGTGGACCTGGACGTCGCCAGCGTCAAGGAAATCGAGGCCCTTCGGCACGTCGGACCGTCCCTGGCCAAGCGCATCGTGGCCGACCGCGATTCGTTCGGTCCCTTTGGTTCTATGGAAGGTCTAGGCGATCCGAACTGCTAA
PROTEIN sequence
Length: 123
MPTPAERKALLFFSVVLVLGASNRAYRTLQSRSPVDAGARSALERQIKAADSARRSGLRKPKRERKLKPPPKPAGPVDLDVASVKEIEALRHVGPSLAKRIVADRDSFGPFGSMEGLGDPNC*