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PLM0_60_b1_sep16_scaffold_1247_15

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(10452..10889)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 143.0
  • Bit_score: 112
  • Evalue 1.90e-22
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 145.0
  • Bit_score: 145
  • Evalue 1.00e-32
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 145.0
  • Bit_score: 145
  • Evalue 5.00e-32

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 438
ATGCTCGGGTCGCGGGTAGATGCGGACGACGCGCTTCAGTCGGCTTTCATGCGTGCTTTCCGCGGACTTCGCTCCTGCAAGGACCCGGATCATTTCGGAGGTTGGCTCTACCAGATCGTCGTCAACGAGTGCAGGACGTACGCATCGCGGCAGCGGCGCCGGGAGCTCCGGTTTCCTCCAGCCGCAGAAGCGATCGAGCGGGCAGTCGCACCCGGTTCTGAAGACGAGGCCGAAAGAGATGTGGGCGGGCACATCGAGCGTGCGCTGAGCATGCTTCCGAGCGAGCAGCGCGAGGCTTTCCTGTTGAAGCATGTGGAAGAGCTGACTTACGAGGAGATCGCCGCGATGACGGGTGTGAGTGTTCCGGCGTTGAAGATGAGAGTGAAGCGGGCGTGTGACGGGCTTCGCGACCTACTTGAAGGGGTTTACCATGGCTGA
PROTEIN sequence
Length: 146
MLGSRVDADDALQSAFMRAFRGLRSCKDPDHFGGWLYQIVVNECRTYASRQRRRELRFPPAAEAIERAVAPGSEDEAERDVGGHIERALSMLPSEQREAFLLKHVEELTYEEIAAMTGVSVPALKMRVKRACDGLRDLLEGVYHG*