ggKbase home page

PLM0_60_b1_sep16_scaffold_1365_6

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 5432..5989

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 186.0
  • Bit_score: 223
  • Evalue 2.40e-55
Peptide deformylase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A607_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 169.0
  • Bit_score: 193
  • Evalue 1.90e-46
Peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 186.0
  • Bit_score: 223
  • Evalue 4.80e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 558
GTGAGCATCCTCGATATCCGGGTGTTGGGTGACCCGGTTCTTCGCAAGCCGACAAAGCGCGTCACCGAGGTCACCGACGAGCTGCGCAAGCTGATCGCCGACATGTTCGAGACGATGTACGCGGCGGAAGGGATCGGGCTGGCCGCGCCACAGGTGGGTCGCATTGAAAGGCTGGCGGTCGTCGACGTCGAAGGAAAGAAGTTCACGCTCATCAATCCCGAGATCGTGTCGAAGAACAGCGCTCCGGAGAAAGCCGAAGAGGGATGCCTTTCGATCCCCGATATCTACGGCGATGTCGAGCGGCCGGCCGAAGTCACCATTCGCGCCATCGATGAAAATGGGAATGAGTACGAAGCTTCCGGCAACGAGCTGCTCGGCCGCGCCTTCCAGCACGAGATCGACCACCTCGACGGAAGGCTGTTCATCGACTACCTGAGTCCGCTCAAGCGGAAAGCGGCGCTGTCCAAGTGGGAGAAGGCGAAGGACGAATATCCGGGCAACGTCCGGAAGGTGCGCACCGAGGAGAAGGGTGAGCACCATCACGAGACGGAGATGTAG
PROTEIN sequence
Length: 186
VSILDIRVLGDPVLRKPTKRVTEVTDELRKLIADMFETMYAAEGIGLAAPQVGRIERLAVVDVEGKKFTLINPEIVSKNSAPEKAEEGCLSIPDIYGDVERPAEVTIRAIDENGNEYEASGNELLGRAFQHEIDHLDGRLFIDYLSPLKRKAALSKWEKAKDEYPGNVRKVRTEEKGEHHHETEM*