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PLM0_60_b1_sep16_scaffold_1736_12

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 8038..8634

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC29_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 182.0
  • Bit_score: 255
  • Evalue 4.30e-65
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 182.0
  • Bit_score: 255
  • Evalue 1.20e-65
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH40056.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 182.0
  • Bit_score: 255
  • Evalue 6.10e-65

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 597
GTGACTAAGCAAGAGTCCGAGATGCCAATCGATGAGCTCGACCTCAAGCGAGCGATAGCCGGCGACGAGAGGGCGATGCGGCGGCTTTGGTCGCAGCATGCGCCGCACATCGACGCGGTCGTACGCAGGCTTTGCGGCGACGCGGAGCTGGCCGCGGACATCTCGCAGGAGGTCTGGATGCAGATATTCAGAGCGCTCCCAAGCTATCGGGGCGACTCGCAATTCGGCACCTGGGCCCACCGCATTGCGGTGAACCGCACTCTCAATGCGCTGCGCAAGATCAGGCGGCTCGCGAAGCTGGAGACCGACATCGAGGACGACTCCGCGATCACGGAGATCGACAGCGATCGGACCTTCCTGGCGGAATCCATCGAGCAGGCTATGACAAGGCTCTCGCCGGGGGCGAGAGCGGTGTTCGTGCTTCATGACATAGAAGGGTACACGCACGGAGAGATCGGAGAGGAGCTCGGAATCACTCCGGGTGGATCGAAATCGCAATTGTTCAAGGCGCGCGCCAAGCTGCGCAGGCTGCTGGCGCATCTAGTGGATGAATCAATACCTGTTGCAGGAAAGGGGAAGAACCATGTCTCTGTCTGA
PROTEIN sequence
Length: 199
VTKQESEMPIDELDLKRAIAGDERAMRRLWSQHAPHIDAVVRRLCGDAELAADISQEVWMQIFRALPSYRGDSQFGTWAHRIAVNRTLNALRKIRRLAKLETDIEDDSAITEIDSDRTFLAESIEQAMTRLSPGARAVFVLHDIEGYTHGEIGEELGITPGGSKSQLFKARAKLRRLLAHLVDESIPVAGKGKNHVSV*