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PLM0_60_b1_sep16_scaffold_2136_4

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(3476..4867)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 466.0
  • Bit_score: 642
  • Evalue 4.10e-181
Ribosomal protein S12 methylthiotransferase RimO Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 473.0
  • Bit_score: 610
  • Evalue 7.30e-172
Ribosomal protein S12 methylthiotransferase rimO similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 466.0
  • Bit_score: 642
  • Evalue 8.30e-182

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1392
GTGAAAGTCGGCGTCATCACGCTGGGTTGCGACAAGAACACGGTCGACAGCGAGCGCTACCTCGCGCAGCTGTCGGATTTTTCCGCAGAATACACTGCCGATCTCGCCGAAGCCGAGGTGATCATCGTCAACACCTGCGGATTCATCGACGCCGCGAAGAAAGAATCAATCGATGCGATGATCGAAGCCGCGCGTTTCAAGACGACCGGGCGGTGCCAGGCCGTCGTCGCTGTTGGCTGCATGATCGAGCGCCACAAGGACGAGCTCGTCGATGCGCTGCCTGAAGTCGACCTCTTCCTCGGCTCCTCCGAAATGCAGCGCCTCGTGCCGGAGCTCAGTGAGCGCGGACTCCTGGGTGAGGCGAGCGGAGAGCTCCACCCCGGCGTTCGCATCTACACCGGAGACCTTCCGCACGTCCGCTACATGAAAATCAGCGAGGGATGCGATCACGGCTGTGCGTTCTGCGCGATACCTCTCATGCGCGGCAAGCACCGGTCATTCGCGCTCGACGAAGTCGTAAGCGAGGCCCAGCTCCTCGAGTTGCAGGGGGCGCGCGAGCTCAACCTCGTGGCGCAGGATCTCGCGCACTACGGACGCGACCGCCGCGACGGCAACAAGCTGCCCGAGCTGCTGGAGGCGCTCGTGGCGGAGACATCGATTCCCTGGATCCGCATGCTTTATCTCTACTCCGCGGGCATCACCGACAGATTGCTCGAAGTCGTCGCACACCAGCCGCGGATTCTTCCCTATCTCGACATGCCCATTCAGCACGGGTCCGATATCGTCCTCGCGCGTATGCGGCGTCCCGAGAGGAAGCGGACGATTCGCGAACGTGTCAAGAAATTCCGTGACGCGGTTCCCGATGTCGCGATACGCAGCACGTGCATCGTCGGCTTTCCCGGCGAAACCGAAGAACAGTTTGCAGAGCTGTTGGAGTTCCTGCAGGAGATACAGTTCGAGCGCGTCGGCGCATTCACTTATTCGCCGCAGGAAGGCACGCGCGCCGCGCAGTACGCGGACGATGTCCACGACACGGTGAAGCGCGAGCGGTTGGAGAAACTCACGGAAACTCAGCGAGCGATTACGGCAGAGCGCTACGAGTCGCGCCTTGGACGCACGGCACTCGCCCTCGTCGATCGCACCGACGTGGAGAGCGGAACGTCGCAGGCGAGGTTACCATGGCAAGCCGACGACATCGATGGGGTGACGCAGATCGATGAAGCGCTTCCTCCCGGCACGATCGCCGAAGTCGCGGTGGAAGAGGTTGTCGACGACTACGACTTCCAGGCATCGGTCATTCGTGTCGCGCTACCGGCGGGGGTTCCGGAGCGTCGTCGCATCTCGCGCGAGCTTCCAGTCAAGCAACTGACGATCGGAAGCTACGGCCGCTAG
PROTEIN sequence
Length: 464
VKVGVITLGCDKNTVDSERYLAQLSDFSAEYTADLAEAEVIIVNTCGFIDAAKKESIDAMIEAARFKTTGRCQAVVAVGCMIERHKDELVDALPEVDLFLGSSEMQRLVPELSERGLLGEASGELHPGVRIYTGDLPHVRYMKISEGCDHGCAFCAIPLMRGKHRSFALDEVVSEAQLLELQGARELNLVAQDLAHYGRDRRDGNKLPELLEALVAETSIPWIRMLYLYSAGITDRLLEVVAHQPRILPYLDMPIQHGSDIVLARMRRPERKRTIRERVKKFRDAVPDVAIRSTCIVGFPGETEEQFAELLEFLQEIQFERVGAFTYSPQEGTRAAQYADDVHDTVKRERLEKLTETQRAITAERYESRLGRTALALVDRTDVESGTSQARLPWQADDIDGVTQIDEALPPGTIAEVAVEEVVDDYDFQASVIRVALPAGVPERRRISRELPVKQLTIGSYGR*