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PLM0_60_b1_sep16_scaffold_2136_7

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(5965..6636)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 223.0
  • Bit_score: 367
  • Evalue 8.80e-99
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 223.0
  • Bit_score: 375
  • Evalue 5.40e-102
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG90459.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 223.0
  • Bit_score: 375
  • Evalue 2.70e-101

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 672
GTGGCAAAAAAATACCAGAATCAGGGAGTCTCACTCTCCGATCTGATCAACGAGGGCAACCTCGGCCTCATTCGCGCGGCGCACAAGTTCGACGAGACGAAGGGCATCAAGTTCATCTCGTACGCCGTGTGGTGTATCCGCCAGTCGATTCTCCAGGCGCTGGCGGAGCAGTCCAGGATCGTGCGCGTGCCGCTCAATCGCGCGGGTACTCTGCATCGCATTGGAAAGCGAGCGAGTAGTCTGTTACAGGAGCTCGGACGACAGCCGACCAATCTCGAGATTGCCGATGGAATGGACATCAGCGAGGACGAGGTCGCGAAGACGATGATGATCTCGCAGGTCCATCTGTCACTCGACGCGCCAATGACGCCGGGCGAAGACAATCGCCTGCTCGATTATCTCCCCGACAACATGAATCCGACGCCGGACGAGATCACGTTCGAAAAGGCGTTGTCGGAGGCGATCGAGGAATCCCTAGCCTCGTTGAAGGAACGCGAGTCCAAGATTCTGCGTCTGTATTTCGGGCTCGATGGTGCGGACCCGATGACGCTCGAGGACATTGGGACGCTGCTCCAGATCACCCGTGAGCGGGTGCGGCAGATCAAGGAGAAGGCGCTGCTCAAGCTGCGGCACAATTCGCGGAGACGCTCACTGGAGTCGTTCCTCGGCTGA
PROTEIN sequence
Length: 224
VAKKYQNQGVSLSDLINEGNLGLIRAAHKFDETKGIKFISYAVWCIRQSILQALAEQSRIVRVPLNRAGTLHRIGKRASSLLQELGRQPTNLEIADGMDISEDEVAKTMMISQVHLSLDAPMTPGEDNRLLDYLPDNMNPTPDEITFEKALSEAIEESLASLKERESKILRLYFGLDGADPMTLEDIGTLLQITRERVRQIKEKALLKLRHNSRRRSLESFLG*