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PLM0_60_b1_sep16_scaffold_1955_15

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 11054..12994

Top 3 Functional Annotations

Value Algorithm Source
Acyl-CoA dehydrogenase Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 629.0
  • Bit_score: 711
  • Evalue 5.50e-202
acyl-CoA dehydrogenase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 633.0
  • Bit_score: 662
  • Evalue 1.10e-187
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 606.0
  • Bit_score: 802
  • Evalue 2.60e-229

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1941
ATGAACGACATATCGGTCGGCACCGCAAGCGAAAAAGAAGCGCGCGACGTAGCAGAGAGTGCGCGCGAGACCGAGTGGACGCATCCGAGCTTCGTGCGCGAGCTCTTCCTCGGACGGTTCCGTCTTGATCTGATCCACCCGCACCCGCCTCCGGATACAGCGGAAGAAGCTCGCGCTAAACCGTTCATGGACAAGCTGCGCTCGTTCATGGAGCGCGTGGATTCCGAAGAGATCGATCGCACTGGTGAGATCCCCGAGCCGGTCGTGCAGGAGCTCCGCGACATGGGAGCCTTCGGCATCAAGATCCCGAAAGAGTACGGTGGGCTCGGTCTGTCGCAAACCAGCTATATCCGCGCGATAGAGATGGTGACGTCCAAGGATGGATCTCTTACGGCGCTGCTGTCAGCGCACCAATCAATCGGTGTCCCTCAGCCACTCAAGCTGTTCGGCACCGAGGAACAAAAGCGCAAATACTTCCCGCGTCTCGCCAAGGGCGCGATCTCCGCATTCGCACTCACCGAAGTCGACGCGGGATCCGATCCCGCCAACATGCGCTGCACTGCCACTCCGACCGCGGACGGAAAGCATTTCATCATCAACGGCGAAAAGCTCTGGTGCACCAATGGAACTCGCGCGGAGCTGTTCGTGGTGATGGCGAGGACACCGGAGAAGGTGATCAAAGGAAAGCCAGTGAAGCAAATCACTGCTTTCATCGTCGAGTCGTCGATGCCGGGCGTGGAAGTCGTTCACCGACTTCGCTTCATGGGACTCAAGGCGATCGAGAATGGCGTCATTCGCTTCTCCAACGTGAAGGTCCCGCGCGAGAACATGCTCTGGGAGGAAGGGAAGGGTCTCAAGCTCGCGCTAGTCACGCTCAACACGGGACGTCTCACAATTCCCGCCGGTTGCGCCGGGGCGGGAAAGCAAATGGTCTCGATCACGCGCAAGTGGGCGAACGAGCGGGTGCAGTGGGGTCAGCCCATCGGCAAGCACGAAGCCGTGGCGCAGAAAATCGCGCGCATGACGGCGTACACTTTTGCGATGGAGGCGGTGGCCGAGCTATCGGCCGCGCTCTACGAGAAAGGTGGTTACGACATTCGGCTCGAGGCAGCGATCGCCAAGCTGTTCAACACCGAAGCGGGCTGGAGGATCATCGACGACACCATGCAGATTCGCGGTGGCCGCGGCTACGAGATGGCGGAATCACTCGCGCGTCGGGGCGAGCCGGCAATTCCTATAGAGAGGGCGATGCGCGATTTCCGCATCAATCTCATCTTCGAAGGATCGTCGGAGATCATGCGCCTCTTCATCGCGCGTGAAGCGGTCGACCATCACTTCAAGCTGGCGTTCAACATCGTCAACCCCGAATCTTCCTTCAAGGAAAAGCTCTCGGCGATGGCGAACGCGACGCCGTTTTATCTGACCTGGTATCCATCGCGCTGGCTCAATGCGGGCCGCCTCAAGCGTTATGGAGAGTTCGGCAAGCTCGCGGGCCATGTCCGTTACATCGAACGCACCACGCGCCATCTCGGACGCTCGATCTTCCACGCGATGGTCCGATTTGGACCCAAGCTCGAGCGCAAGCAGATGGTGCTCTTCAGAGCGGTGGACATCGGCGCGGAGCTGTTCGCGATGTCGGCTGCTTGCGCGAGGGCGCAGATGTTGTCGAAGCAGGGGAGACCTGAAGCGGTCACGCTAGCCGACGCGTTCTGCATCGAGGCGCGCGAGCGCATCAAGGTGCACTTCGATCAGCTCTTTGGTCCGAACGATCCCGCGCTGTACAAGGTCGCGATGGAAGTTCTCCGGGGAGAGCACGCGTGGCTCGAGCAGGGAATCGTGTCGAGTGTCGCGCACTTCGACAAAACAAAACGGCGCCCCACCGGTGGAGGCGCCGCATTGCCTGCTGATTCAGTTACAGCTACGGTGGGCGCTACACAGTAA
PROTEIN sequence
Length: 647
MNDISVGTASEKEARDVAESARETEWTHPSFVRELFLGRFRLDLIHPHPPPDTAEEARAKPFMDKLRSFMERVDSEEIDRTGEIPEPVVQELRDMGAFGIKIPKEYGGLGLSQTSYIRAIEMVTSKDGSLTALLSAHQSIGVPQPLKLFGTEEQKRKYFPRLAKGAISAFALTEVDAGSDPANMRCTATPTADGKHFIINGEKLWCTNGTRAELFVVMARTPEKVIKGKPVKQITAFIVESSMPGVEVVHRLRFMGLKAIENGVIRFSNVKVPRENMLWEEGKGLKLALVTLNTGRLTIPAGCAGAGKQMVSITRKWANERVQWGQPIGKHEAVAQKIARMTAYTFAMEAVAELSAALYEKGGYDIRLEAAIAKLFNTEAGWRIIDDTMQIRGGRGYEMAESLARRGEPAIPIERAMRDFRINLIFEGSSEIMRLFIAREAVDHHFKLAFNIVNPESSFKEKLSAMANATPFYLTWYPSRWLNAGRLKRYGEFGKLAGHVRYIERTTRHLGRSIFHAMVRFGPKLERKQMVLFRAVDIGAELFAMSAACARAQMLSKQGRPEAVTLADAFCIEARERIKVHFDQLFGPNDPALYKVAMEVLRGEHAWLEQGIVSSVAHFDKTKRRPTGGGAALPADSVTATVGATQ*