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PLM0_60_b1_sep16_scaffold_5133_2

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(1115..5410)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 1427.0
  • Bit_score: 2348
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 1436.0
  • Bit_score: 2289
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 1427.0
  • Bit_score: 2348
  • Evalue 0.0

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 4296
ATGATTGATTTTCGCAGCACGCGCGAGACGCGCGCGTCTTCATTCGATTACATCCAGGTCCGCATCGCTTCTCCCGAAGAGATGCGCGGTCCGAAGGATTCCAAGGAGCGGGAGCGGCTCGAGATGGCCGGCCTCCGCACCTGGTGGTCGTGGGGCGAGGTTCTCAAGCCCGAGACCATCAATTATCGCTCGTTCAAGCCGGAGAAAGATGGCTTGTTTTGCGAGCGGATCTTTGGCCCGGTAAAGGACTGGGAATGCCACTGCGGCAAGTACAAGCGCATCCGTTATCGTGGTGTGATCTGCGATCGCTGCGGCGTCGAAGTTACCCTGAGCCGCGTCCGTCGCGAGCGCATGGGTCACATCGAGCTCGCCGTACCCGTCGCGCACATCTGGTTCTTCAAGACGCTCCCCAGCCCGATGGGCAATCTCGTCGACCTGACGCTGCGTGATCTCGAGAAGGTCATCTACTACTCGAATTACGTCGTCATCGATCCTGGCAAGCAGGAAATCCAGGCGAACGAGCTGCTCGACGAGGACACATTCCTGAACCTGAAGCAGAAGGCGAAGGAAGAGGGAGACAACGCGTTTCTTGCCGACATCGGCGCGCCCGCGGTTCGCGAGCTCCTGAAGAGAATCGACGTCGACAAGGTCGCCGAAGAATTGCGCGCTGGTCTCATCGACGAAGGCTCGCAGCATCGCAAGAAGCAAATGCTGAAGAGGCTCAAAGTAGTTGACGCCTTCCGCAACTCCGGCGATTCCGGCCAAGAGCGCAACAAGGCCGAGTGGCTCATCATGGATGTCATTCCGGTAATTCCGCCGGATCTGCGTCCGCTCGTTCCGCTCGACGGCGGGCGCTTCGCCACGTCCGATCTGAACGATCTGTATCGGCGCGTCATCAACCGCAACAACCGGTTGATGAAGCTGATCTCGCACCGCGCGCCCGAAGTCATTCTCCGCAACGAGAAGAGAATGCTTCAGGAAGCGGTCGATGCATTGTTCGACAACGGTCGCCGCTCGAAGGCGATTCGGGGTCGCGGCAAGCGTCCGCTCAAGTCGCTGTCCGACATGCTGAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGAAAGCGCGTCGATTATTCCGGCCGTTCGGTCATCGTCGTCGGTCCCGAGCTCAAGCTGCACCAGTGCGGTCTGCCCAAGGCGATGGCGCTGGAGCTGTTCAAACCGTTCATCATTCACAAGCTCGTCGAGAAGGGAATCGCCGAGACGGTGAAGCGCGCCAAGAAAATCGTGGAGAAGGAATCTCCCGAGGTGTACGAGATCCTCGAAGAGATCATTCGCGATCACCCGGTGCTATTGAACCGTGCGCCGACACTCCACCGTCTGGGCATCCAGGCGTTCGAGCCGGTGCTCGTGGAAGGAAAGGCCATCAGAATTCACCCCCTCGTCTGCGCTGCGTTCAACGCGGATTTCGACGGTGACCAGATGGCCGTCCACGTTCCGCTTTCGTTCGAGGCTCAGCTCGAGTGCCGTCTGCTCATGCTGTCGTCGAACAACATTCTCAAGCCGTCGGACGGACGTCCCGTCGCCGAGCCGAGCCAGGACATCGTGCTGGGATGCTACTTCGCGACCAAGGCTCCGCCGGGCTTCGAGAAGTTCGACAAGAAGGCCAAGTCGTACACCAACGTCGCCGAGGTCGAGCTCTCGCTGTCGCAGGATCGCGTGACGTTCCACACGCCGATCCGCTACTTCGTGCAGGACGTCGAAGGAGACCGGTGGGTCGACACGACGGTTGGCCGCGTGCTCTTCAACGCCATCATCCCGAAGGAAATCGCTTTCCAGAACCGGGAAATGAAGAAGAAGGCGCTCGGCGAATTGGTTTTCGAGTCATATCGTCGCAGCGGTCTACAGGGAACGGTTCCATTCCTGGATCGCCTGAAGGACTTCGGATTCCGCTACGCCACGCGCGGCGGTGTCTCGATTGGAATCGAAGATCTCCACATCCCGGCCGAGAAGGAGACACTTCTCGCCGAGGCCGAGGAGCGCGTCAACAGATTCCAGAAGGCGTATCAGACGGGCAACATCACGAACGGCGAGCGCTACAACAAGGTGATCGACACCTGGACGCACGCCAACAATGATGTTGCCGACGCGATGGTTCGCGCGATGCGTGAATCAGCCGACGGATTCAACCCGGTGTTCATGATGTTCGACTCCGGATCCCGTGGATCCCGCGATCAGATCCGTCAGCTCGCGGGAATGCGCGGACTGATGGCGAAGCCGCAGAAGAAACTGACCGGAGGAATCGGCGAGATCATCGAAAGTCCGATCAAGTCGAACTTCCGTGAAGGTCTCTCCGTGCTCGAGTACTTCATCTCGACGCACGGCGCACGTAAGGGTCTGGCCGACACCGCGCTCAAGACCGCGGACGCCGGCTATCTCACGCGCCGCCTCGTCGACGTCGCGCAGGATGTGACGATCACCGAAGAGGATTGCGGGACCATCCTTGGCCTCGAGGTCGGAGCGCTGAAGGAAGGGGAGGACATCATCGAGCCGCTGGCCGAGCGTATCGTCGGCACCGTGGCCGCTGAAGACATCTATGATGTGCACGAGATCGACGAGTCCGGCCAGCGGTCGCTGCTGGTGGAGGCAGGTCAGCTCATCGACGAGGATATGGCTCGCGGCATCGAGGAGTCAGGCCTGGAAACCGTGAAAATACGCTCCGTGCTTACTTGTGAGGCGAAGCGCGGTCTCTGCCAGATGTGCTACGGCCGCAACCTCGCGACCATGGGAATGGTCGACAAGGGTGAAGCGGTTGGCATCATCGCCGCGCAGTCGATTGGCGAGCCGGGTACTCAACTCACTCTCCGCACCTTCCACATCGGTGGAACGGCGGCTCGTATCGCTGAGCAGACAGCGCGCAAGTCCAAAGTCGCGGGAACGATCGAGTATGGAGACAGACTTGTCGTCGTCACCAATGCGGAGGGACAGCGGATCGTGACTTCGTACGAGGGCGAGCTGACGATCAGGAGCTCGAGTGAGCGCAACGCCAGCATTGGCGCGCGTCTCCAGGTACCTCTTGGCGCCACGCTGATGGTGAAGGATGGCGACGAGGTGAAGAAGGATCAGATCATTTTCAGCTGGGATCCTTACACGAACCCGATCATCGCCGACGTCGATGGAACACTGCGTTTCGTCGACCTGATTCCGGGTGAGTCGGTGTCCGAGGAGCTCGACGAGCTCACCGGTCTCCGCCAGATCGTCGTCATCGAAGACAAGGAGAAGAAGCTCCACCCGCACATCGAGATCATCGAGACCAAGGGCGGCAAGGAAAAGCGCCTGAGAGACTTCGTGATTCCAGTGGGCGCGCAGCTGACGGTCGAGGACGGCAAGAAAATCAGTGCCGGCACAATCCTCGCCAAGATCAGCCGTGAGGCGTACAAGACCCGCGACATCACGGGCGGCCTGCCGCGCGTCGCGGAGCTGTTCGAGGCGCGGCGTCCGAAAGATCCCGCTACGATCTCCGAGATCGATGGCGAGGTGAGGTTCGGCGACATCAAGCGCGGCAAGCGCGAGATCAGAGTCGTGCCGAAGGACACGCCGGCGGATGCAGAGGAGCAGGGTCAGCTGTACGAAGTGGCGGCGGGCAAGCACCTTCGCGTGCACGCCGGTGACTGGGTGAGAGCGGGCGACCGTCTCTCCGAAGGTCCTGTGAACCCGCACGACATTCTCCGCATCAAGGGACCGCGGGCAGTTCAGGAGTATCTGCTCAACGAAGTGCAGGAGGTTTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATTGGCGTGATCGTACGGCAGATGCTGCAGAAGGTGCGCGTGCTCGAGTCGGGTGAAACCGAGTTCCTCGAGGGCGAGCACGTCGACAAGCAGACCTTCCGCGAAGCGAACGACAAGGCCAAGAAAAAGAAGGAGCTGCCGGCAGTTTCGGAACCGCTACTTCTCGGAATCACCAAGGCCAGCCTCACGACTCAGTCGTTCATCTCGGCGGCGAGCTTCCAGGAGACGACGCGAGTTCTGACCGATGCCGCGATCCGCGGCGCGCGGGACGAGCTGCTCGGACTCAAGGAGAACATCATCATCGGTCACCTCATCCCGGCCGGTACTGGCATGTACCGTTACCAGGAAGTGGATATCGAGGGAGCGCCGGTGCCGCCAGCACCGGAACTTCCGCCGGAGCCCTCGATCGCCGAAATCCTGGCGAGCGATTCGGACACGGATTTCGCGCTGCCGGAGACGGTTGCGGTGCCGGAGGAGATTTAG
PROTEIN sequence
Length: 1432
MIDFRSTRETRASSFDYIQVRIASPEEMRGPKDSKERERLEMAGLRTWWSWGEVLKPETINYRSFKPEKDGLFCERIFGPVKDWECHCGKYKRIRYRGVICDRCGVEVTLSRVRRERMGHIELAVPVAHIWFFKTLPSPMGNLVDLTLRDLEKVIYYSNYVVIDPGKQEIQANELLDEDTFLNLKQKAKEEGDNAFLADIGAPAVRELLKRIDVDKVAEELRAGLIDEGSQHRKKQMLKRLKVVDAFRNSGDSGQERNKAEWLIMDVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLMKLISHRAPEVILRNEKRMLQEAVDALFDNGRRSKAIRGRGKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKAMALELFKPFIIHKLVEKGIAETVKRAKKIVEKESPEVYEILEEIIRDHPVLLNRAPTLHRLGIQAFEPVLVEGKAIRIHPLVCAAFNADFDGDQMAVHVPLSFEAQLECRLLMLSSNNILKPSDGRPVAEPSQDIVLGCYFATKAPPGFEKFDKKAKSYTNVAEVELSLSQDRVTFHTPIRYFVQDVEGDRWVDTTVGRVLFNAIIPKEIAFQNREMKKKALGELVFESYRRSGLQGTVPFLDRLKDFGFRYATRGGVSIGIEDLHIPAEKETLLAEAEERVNRFQKAYQTGNITNGERYNKVIDTWTHANNDVADAMVRAMRESADGFNPVFMMFDSGSRGSRDQIRQLAGMRGLMAKPQKKLTGGIGEIIESPIKSNFREGLSVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVTITEEDCGTILGLEVGALKEGEDIIEPLAERIVGTVAAEDIYDVHEIDESGQRSLLVEAGQLIDEDMARGIEESGLETVKIRSVLTCEAKRGLCQMCYGRNLATMGMVDKGEAVGIIAAQSIGEPGTQLTLRTFHIGGTAARIAEQTARKSKVAGTIEYGDRLVVVTNAEGQRIVTSYEGELTIRSSSERNASIGARLQVPLGATLMVKDGDEVKKDQIIFSWDPYTNPIIADVDGTLRFVDLIPGESVSEELDELTGLRQIVVIEDKEKKLHPHIEIIETKGGKEKRLRDFVIPVGAQLTVEDGKKISAGTILAKISREAYKTRDITGGLPRVAELFEARRPKDPATISEIDGEVRFGDIKRGKREIRVVPKDTPADAEEQGQLYEVAAGKHLRVHAGDWVRAGDRLSEGPVNPHDILRIKGPRAVQEYLLNEVQEVYRLQGVKINDKHIGVIVRQMLQKVRVLESGETEFLEGEHVDKQTFREANDKAKKKKELPAVSEPLLLGITKASLTTQSFISAASFQETTRVLTDAAIRGARDELLGLKENIIIGHLIPAGTGMYRYQEVDIEGAPVPPAPELPPEPSIAEILASDSDTDFALPETVAVPEEI*