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PLM0_60_b1_sep16_scaffold_6160_4

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 5227..6369

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000255|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000255|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000255|HAMAP-Rule:MF_01884}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 379.0
  • Bit_score: 572
  • Evalue 4.30e-160
Transcription termination factor Rho Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 379.0
  • Bit_score: 572
  • Evalue 3.10e-160
transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 379.0
  • Bit_score: 572
  • Evalue 8.70e-161

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1143
ATGGCTCCCGTCGTTCCGGATGGTGAAACCACCGGCTGGTTTGACCCGCAGCGCGAAGGCGGGTTCGTTCGCCGCGCCGCGAACAGCTATCTGGCCGAGCCGGGCGATGCCTACGTTCCGACGCAAATCATGCGGCAGTACATGCTGCGCCGCGGCGATCAGGTCCTCGCCACGACCGGGCACGACCACCGCAATCGCGTCGTCGTCGTCGATATTCAGCAGATCAACGGCGCTGATCCGGCGGAAGCGGCAAGGCGTCCAGATTTCGGATCACTCACCGCGTCATATCCTGAGCGCAAACTGAAGCTCGAAACCGGCAAGCCTGCCAAGAGCGGACCCGAGCTGACGCGCAGAGCAATCGATCTCATCGCACCAATCGGATACGGGCAGCGCGCACTCATCGTCGCCCCGGCGCGAGCCGGAAAAACGATGCTGCTCCAGGCGATCGTCGAAGGCGTGGCGATCAACCACCCGCAGGCGGCACTGCTCGTTCTGCTCGTGGACGAGCGTCCCGAGGAAGTGAGCGAGATGATCACTTGGGGCTATGGCGAGGTTGTTGCCTCCAGCTTCGATATGCCCGCGGTTCGCCACACTGACGTCACCGAGATGGTGCTCGAGCGGGCCCGCCGCCTCGTGGAGCTAGGCAAGGATGTCGTCATCGTGCTGGATTCCATTACCCGTATGGCGCGCGCCTACAACACTGTGGAGCGCGGCACCGGCCGCACACTCTCGGGTGGACTCGATTCTTCCGCGATGGCCAAACTGGCCAAACCGAAGGCATTCTTCGGCTCCGCGCGCTCGGTCGCTCCGGAACATGGAGGCGGATCCCTCACTATCATTGCCACGGCACTCGTCGAAACCGGATCGCGGATGGACGACGTCATCTTCGAAGAGTTCAAGGGCACTGGTAACTGCGAGATCAAGCTTGATCGCTCACTTTCCGAGAAACGAATCTTCCCCGCCATCGACGTCGCCACCAGCGGCACGCGTCGTGAAGACAAGCTCTTCCGTCCTGATCAGCTAGAGCATGTCTACACACTCCGACGCGGTCTTCAACAAATGCCATCCAGTTCGGCGATGGAATGGCTCATCAAGCGCATCGCGGCGACGCCAAGTAACGACGCGCTGCTGGAAGGCCTGTAG
PROTEIN sequence
Length: 381
MAPVVPDGETTGWFDPQREGGFVRRAANSYLAEPGDAYVPTQIMRQYMLRRGDQVLATTGHDHRNRVVVVDIQQINGADPAEAARRPDFGSLTASYPERKLKLETGKPAKSGPELTRRAIDLIAPIGYGQRALIVAPARAGKTMLLQAIVEGVAINHPQAALLVLLVDERPEEVSEMITWGYGEVVASSFDMPAVRHTDVTEMVLERARRLVELGKDVVIVLDSITRMARAYNTVERGTGRTLSGGLDSSAMAKLAKPKAFFGSARSVAPEHGGGSLTIIATALVETGSRMDDVIFEEFKGTGNCEIKLDRSLSEKRIFPAIDVATSGTRREDKLFRPDQLEHVYTLRRGLQQMPSSSAMEWLIKRIAATPSNDALLEGL*