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PLM0_60_b1_sep16_scaffold_10414_3

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 2046..2588

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, partial Tax=Burkholderia oklahomensis RepID=UPI00016A2671 similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 185.0
  • Bit_score: 142
  • Evalue 3.70e-31
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 175.0
  • Bit_score: 144
  • Evalue 1.10e-31
RNA polymerase sigma factor, sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 185.0
  • Bit_score: 142
  • Evalue 1.10e-31

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Taxonomy

Burkholderia sp. lig30 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGGCGGTGCCGAGGCTCCGCAGACAGGGCGATTCGAACGGACTGTACTCCCGCACTTATCCGCCGGGTTCACGCTGGCGATGTATCTCACCGGTAATTCGGCGGACGCGGAAGACGCCGTTCAGGAAGCCATTCTGCGTTCAGTCCGATACTTTCAAACCCTTCGTGATGATGATGCACGCGCGTGGTTTCTGACAATCGTGCGTCGGGTGTGTCTCACGGCGTACCGCACGAATCGTCCCCAGGGAACCGATATGATCTCGATAGACACGGTCGGGCTTCAGTTAGTCGATGATCGTGAACAGCCTGACACTGCTGCTGAGCGATTGCAGGTTCAGCAGCGCGTGCGCGACGCGATCGGCCAACTTCCGCCGTTGCTCCGCGAGGCGATCGTTCTCAGAGAGCTTCAGTCCTGCTCTTACGCCGAGATAGCTGCTGTTACTGAGGTAGCTGTTGGAACGGTAATGTCGCGTTTGTCGAGAGCGAGAGCGCAACTTGCTGCTCTTCTGCGCGACGTCGTGGATTTTGGAGATGTCGCATGA
PROTEIN sequence
Length: 181
MGGAEAPQTGRFERTVLPHLSAGFTLAMYLTGNSADAEDAVQEAILRSVRYFQTLRDDDARAWFLTIVRRVCLTAYRTNRPQGTDMISIDTVGLQLVDDREQPDTAAERLQVQQRVRDAIGQLPPLLREAIVLRELQSCSYAEIAAVTEVAVGTVMSRLSRARAQLAALLRDVVDFGDVA*