ggKbase home page

PLM0_60_b1_sep16_scaffold_12972_3

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 3131..3718

Top 3 Functional Annotations

Value Algorithm Source
membrane protein Tax=Cytophagales str. B6 RepID=UPI0003B71FA3 similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 208.0
  • Bit_score: 110
  • Evalue 1.30e-21
Outer membrane protein-like protein {ECO:0000313|EMBL:EHQ26938.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 198.0
  • Bit_score: 105
  • Evalue 5.90e-20
protein of unknown function DUF4142 similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 190.0
  • Bit_score: 104
  • Evalue 2.00e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 588
ATGGTGGTTTCAAGATCCAGAGTCGCAATGCTGGCTGTCGCGGCGCTTGCGGTCGCCGCATGCAGCAAAAAGGAAAACTACGGGGCTGATACGGCTGCGGCTTCGAGTGCTGCGGCTGCCGACACCTCGGCGATGGCGGGGGGTGCATCGACCACCACTTCGGGCAGCTGGACCGATGCCAATATCTTGGGTGACAGCGCCGCCGGGTCCGTTGCTGCGACGAAAGGAACGAGCGCAGCCGTGCGGGACTTCGGAAAGCGGATGATGCGTGACCATCATCAGCTACGTCTCCAGGGACAGGCACTGGCGAAGAAGCTGAAGATCACTCCGACGCCGCCGACAGATGACAACATGGTTTCCGATTCGCAGAAAAACATTGACAACCTGAATTCGACGACGAAAGGGAAGGACTTCGACAAGGCCTACATCGACAGCGAAGTGGAGGCGCACAAAAAGGTGCTCCAACTCGCTACGGACGCAATGAAGCAGGCACAGAACACGGAGTTGAAAAATCTCATCCAGAAGGCGGCGCCCGTGATACAGGGACACCTCGACAAAGCTGAATCGATTCAGAAAACTGTGAAGTAG
PROTEIN sequence
Length: 196
MVVSRSRVAMLAVAALAVAACSKKENYGADTAAASSAAAADTSAMAGGASTTTSGSWTDANILGDSAAGSVAATKGTSAAVRDFGKRMMRDHHQLRLQGQALAKKLKITPTPPTDDNMVSDSQKNIDNLNSTTKGKDFDKAYIDSEVEAHKKVLQLATDAMKQAQNTELKNLIQKAAPVIQGHLDKAESIQKTVK*