ggKbase home page

S3-18-all-fractions_k255_2785327_2

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 2982..3635

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, ECF-like family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC15_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 178.0
  • Bit_score: 200
  • Evalue 1.40e-48
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 191.0
  • Bit_score: 242
  • Evalue 9.00e-62
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG92680.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 191.0
  • Bit_score: 242
  • Evalue 4.50e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 654
ATGTCTGCACTACTCGATGTTGAAACCGTGATCGACCGTTTGCCAGAGCCGAGTGAGCAGCCAACGAGCATTACCGAGCTGCTCGACGATCTGCGCGGGGGTCGGCGAGAAGCGTTCGACCAGATCCTGCCGCTGGTCTACCAGGAATTGCGACGCGCGGCCCGCCGAGAGCTCGCAGTTCGCCCGAGCGACACGCTGTCCACGACCGCGCTCGTCCACGAGCTGTACCTCAAATTCTCGAGAGCACAGCGCACCGACTGGCGCAACCGCTCGCACTTCCTCAGCGTTGCCGCCGTGGCCATGCGACACATTCTCGTCGACCGTGCGCGACGTCGCACCGCGGACAAGCGCGGCGGCCCGCAGCGGCAGGTGACGCTCGACGACAACCTCATTGCGGCCGATTCGCAGGCGGAGTCGCTGCTCGAGCTCCACGAGGCACTCGACCAACTGGCGCTGCTCGACCCGCGACTCGCGCGCGTCGTGGAATGCCGGTTCTTCGGCGGCATGACGGAGCAGGAGACGGCGGACGCACTGCGCGTCACCGAACGAACCGTTCGCCGTGACTGGATCAAGGCGCGCGGGCTGCTGTATCAGGCACTCGGCGCGAAGGCGACGGCGGAGCTGACGAACCCGAACGCGCGTCGCGAACGTTGA
PROTEIN sequence
Length: 218
MSALLDVETVIDRLPEPSEQPTSITELLDDLRGGRREAFDQILPLVYQELRRAARRELAVRPSDTLSTTALVHELYLKFSRAQRTDWRNRSHFLSVAAVAMRHILVDRARRRTADKRGGPQRQVTLDDNLIAADSQAESLLELHEALDQLALLDPRLARVVECRFFGGMTEQETADALRVTERTVRRDWIKARGLLYQALGAKATAELTNPNARRER*