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B_1_S1_Biohub_coassembly_k141_5567968

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5567968_1
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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142..513
-----------------
DNA (372bp)
protein (124aa)
NADH-quinone oxidoreductase subunit A Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z801_DEHE1
proton-translocating NADH-quinone oxidoreductase, A subunit
Tax=RBG_13_Chloroflexi_51_52_curated
B_1_S1_Biohub_coassembly_k141_5567968_2
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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504..1103
-----------------
DNA (600bp)
protein (200aa)
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0K6_DEHLB
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_5567968_3
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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1109..1564
-----------------
DNA (456bp)
protein (152aa)
NADH dehydrogenase subunit C Tax=Dehalococcoides mccartyi RepID=A5FQY5_DEHSB
NADH dehydrogenase (ubiquinone), 30 kDa subunit
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_5567968_4
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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1564..2664
-----------------
DNA (1101bp)
protein (367aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0K8_DEHLB
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5567968_5
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

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2665..3789
-----------------
DNA (1125bp)
protein (375aa)
NADH dehydrogenase (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0K9_DEHLB
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_5567968_6

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3779..4276
-----------------
DNA (498bp)
protein (166aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0L0_DEHLB
Marine sediment metagenome DNA, contig: S03H2_L05954 {ECO:0000313|EMBL:GAH40170.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
4Fe-4S ferredoxin
B_1_S1_Biohub_coassembly_k141_5567968_7
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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4280..4765
-----------------
DNA (486bp)
protein (162aa)
nuoJ; NADH ubiquinone oxidoreductase chain J (EC:1.6.5.3)
NADH ubiquinone oxidoreductase chain J Tax=Dehalococcoides mccartyi GY50 RepID=V5QBC5_9CHLR
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5567968_8

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4766..5077
-----------------
DNA (312bp)
protein (104aa)
NADH-quinone oxidoreductase subunit K Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0L2_DEHLB
Marine sediment metagenome DNA, contig: S03H2_S18649 {ECO:0000313|EMBL:GAH71018.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NADH-ubiquinone oxidoreductase subunit 4L
B_1_S1_Biohub_coassembly_k141_5567968_9

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5253..5447
-----------------
DNA (195bp)
protein (65aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PNG5_9ZZZZ
Marine sediment metagenome DNA, contig: S06H3_S07566 {ECO:0000313|EMBL:GAI18396.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_5567968_10
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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5494..7524
-----------------
DNA (2031bp)
protein (677aa)
Proton-translocating NADH-quinone oxidoreductase, chain L Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0L3_DEHLB
proton-translocating NADH-quinone oxidoreductase subunit L
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5567968_11
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

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7541..9016
-----------------
DNA (1476bp)
protein (492aa)
nuoM; NADH ubiquinone oxidoreductase chain M (EC:1.6.5.3)
NADH ubiquinone oxidoreductase chain M Tax=Dehalococcoides mccartyi BTF08 RepID=M1QZM4_9CHLR
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_5567968_12
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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9193..10662
-----------------
DNA (1470bp)
protein (490aa)
NADH-quinone oxidoreductase subunit N Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0L5_DEHLB
proton-translocating NADH-quinone oxidoreductase subunit N
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_5567968_13
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(10765..11025)
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=CG_Dehalo_01
B_1_S1_Biohub_coassembly_k141_5567968_14
unknown

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comp(11007..11153)
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5567968_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(11150..11377)
-----------------
DNA (228bp)
protein (76aa)
Uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
B_1_S1_Biohub_coassembly_k141_5567968_16
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(11432..12472)
-----------------
DNA (1041bp)
protein (347aa)
dly:Dehly_1121 N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase [EC:1.2.1.38 1.2.1.-] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5567968_17
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(12539..14341)
-----------------
DNA (1803bp)
protein (601aa)
Sodium/hydrogen exchanger Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1E0_DEHLB
sodium/hydrogen exchanger
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5567968_18
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(14898..16196)
-----------------
DNA (1299bp)
protein (433aa)
Putative uncharacterized protein Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIW2_MOOTA
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5567968_19
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(16475..16771)
-----------------
DNA (297bp)
protein (99aa)
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_5567968_20
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

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comp(16768..18195)
-----------------
DNA (1428bp)
protein (476aa)
Uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TU6_RHOP5
hypothetical protein
Tax=RBG_16_Chloroflexi_50_11_curated
B_1_S1_Biohub_coassembly_k141_5567968_21
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(18322..20346)
-----------------
DNA (2025bp)
protein (675aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036744DA
von Willebrand factor type A
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_5567968_22
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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comp(20500..21903)
-----------------
DNA (1404bp)
protein (468aa)
Magnesium chelatase subunit ChlI Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6I7_9CHLR
magnesium chelatase subunit ChlI
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5567968_23
unknown

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comp(22052..22297)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5567968_24
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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22826..23266
-----------------
DNA (441bp)
protein (147aa)
D-tyrosyl-tRNA(Tyr) deacylase Tax=Fervidobacterium pennivorans DSM 9078 RepID=G6HS86_FERPE bin=RBG2 species=Fervidobacterium pennivorans genus=Fervidobacterium taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG2 organism_group=Chloroflexi
D-tyrosyl-tRNA(Tyr) deacylase
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_5567968_25
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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23263..24120
-----------------
DNA (858bp)
protein (286aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000366FC7E
protein UreH
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5567968_26
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(24360..25250)
-----------------
DNA (891bp)
protein (297aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
UniRef90_F2NN76 Nicotinate-nucleotide pyrophosphorylase Tax=Marinithermus hydrothermalis DSM 14884 RepID=F2NN76_MARHT bin=RBG2 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG2 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5567968_27
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(25287..25667)
-----------------
DNA (381bp)
protein (127aa)
Preprotein translocase, YajC subunit Tax=Bacteroides RepID=C3RDH1_9BACE bin=RBG2 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG2 organism_group=Chloroflexi
preprotein translocase subunit YajC
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_5567968_28
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(25677..26996)
-----------------
DNA (1320bp)
protein (440aa)
sti:Sthe_1020 RNA modification enzyme, MiaB family (EC:1.3.1.74); K06168 bifunctional enzyme involved in thiolation and methylation of tRNA bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
MiaB family RNA modification protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_5567968_29
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

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comp(27122..27658)
-----------------
DNA (537bp)
protein (179aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I Tax=Chthoniobacter flavus Ellin428 RepID=B4D1T8_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
B_1_S1_Biohub_coassembly_k141_5567968_trna_1
unknown

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comp(27816..27904)
-----------------
DNA (89bp)
transferRNA Ser
Displaying items 1-30 of 39 in total

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