ggKbase home page

S_p1_S3_coassembly_k141_1818500

Search features with annotation key words

Displaying items 61-90 of 312 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1818500_59
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(47135..47503)
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
50S ribosomal protein L14
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_60
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(47506..47907)
-----------------
DNA (402bp)
protein (134aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
30S ribosomal protein S17
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_61
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(47904..48185)
-----------------
DNA (282bp)
protein (94aa)
coiled-coil 87..108 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_62
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(48182..48595)
-----------------
DNA (414bp)
protein (138aa)
50S ribosomal protein L16 Tax=uncultured bacterium RepID=K2DG84_9BACT
LSU ribosomal protein L16P
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_63
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(48597..49238)
-----------------
DNA (642bp)
protein (214aa)
30S ribosomal protein S3 Tax=uncultured organism RepID=U3GQV3_9ZZZZ
rpsC; 30S ribosomal protein S3
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_64
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(49238..49633)
-----------------
DNA (396bp)
protein (132aa)
50S ribosomal protein L22 Tax=uncultured bacterium RepID=K2DG72_9BACT
50S ribosomal protein L22
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_65
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(49640..49924)
-----------------
DNA (285bp)
protein (95aa)
30S ribosomal protein S19 Tax=uncultured bacterium RepID=K2BYM3_9BACT
30S ribosomal protein S19
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_66
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(49924..50685)
-----------------
DNA (762bp)
protein (254aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
50S ribosomal protein L2 {ECO:0000313|EMBL:KKR17059.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
rplB; 50S ribosomal protein L2
S_p1_S3_coassembly_k141_1818500_67
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(50687..51115)
-----------------
DNA (429bp)
protein (143aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
rplW; 50S ribosomal protein L23
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_1818500_68
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(51112..51813)
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K2CWM6_9BACT
50S ribosomal protein L4P
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_69
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(51803..52483)
-----------------
DNA (681bp)
protein (227aa)
rplC; ribosomal protein L3; K02906 large subunit ribosomal protein L3 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
50S ribosomal protein L3
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_70
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

52789..53022
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DUH3_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_1818500_71
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(53047..53355)
-----------------
DNA (309bp)
protein (103aa)
ribosomal protein S10; K02946 small subunit ribosomal protein S10 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
rpsJ; 30S ribosomal protein S10
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_72
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(53495..54679)
-----------------
DNA (1185bp)
protein (395aa)
Elongation factor Tu Tax=uncultured bacterium RepID=K2CFW9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_1818500_73
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(54768..55019)
-----------------
DNA (252bp)
protein (84aa)
addiction module toxin RelE/StbE; K06218 RelE protein bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_1818500_74
GWA2_OP11_42_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(55019..55282)
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70302.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_42_7.;"
prevent-host-death family protein bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
S_p1_S3_coassembly_k141_1818500_75
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(55337..57475)
-----------------
DNA (2139bp)
protein (713aa)
Elongation factor G Tax=uncultured bacterium RepID=K2CFW3_9BACT
translation elongation factor G
Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
S_p1_S3_coassembly_k141_1818500_76
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(57475..57702)
-----------------
DNA (228bp)
protein (76aa)
coiled-coil 18..46 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_77
unknown

Not on your lists

comp(57764..57967)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1818500_78
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(58003..58479)
-----------------
DNA (477bp)
protein (159aa)
30S ribosomal protein S7 Tax=uncultured bacterium RepID=K2CFZ4_9BACT
rpsG; 30S ribosomal protein S7
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_79
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(58501..58965)
-----------------
DNA (465bp)
protein (155aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
30S ribosomal protein S12 {ECO:0000313|EMBL:KKR17046.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
rpsL; 30S ribosomal protein S12
S_p1_S3_coassembly_k141_1818500_80
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(58968..62660)
-----------------
DNA (3693bp)
protein (1231aa)
ace:Acel_0300 DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_81
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(62657..66025)
-----------------
DNA (3369bp)
protein (1123aa)
adg:Adeg_1532 DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_82
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(66153..66527)
-----------------
DNA (375bp)
protein (125aa)
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26)
Riboflavin biosynthesis protein RibF Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LWM6_9FIRM bin=ACD38 species=Megasphaera genomosp. type_1 genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_83
GWA1_OP11_37_7, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(66529..67485)
-----------------
DNA (957bp)
protein (319aa)
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KKQ36584.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_37_7.;"
aminodeoxychorismate lyase; K07082 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
YceG family protein
S_p1_S3_coassembly_k141_1818500_84
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(67482..67868)
-----------------
DNA (387bp)
protein (129aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_85
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(67884..68525)
-----------------
DNA (642bp)
protein (214aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CFU6_9BACT
sortase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_86
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(68522..70741)
-----------------
DNA (2220bp)
protein (740aa)
seg 390..411 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_1818500_87
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(70796..72574)
-----------------
DNA (1779bp)
protein (593aa)
alanyl-tRNA synthetase AlaRS (EC:6.1.1.7)
Alanine--tRNA ligase Tax=Spirochaeta thermophila RepID=E0RRW1_SPITD bin=GWF1_OP11_31_35_complete species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_1818500_88
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(72597..73310)
-----------------
DNA (714bp)
protein (238aa)
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
Displaying items 61-90 of 312 in total

View Taxonomy