ggKbase home page

S_p1_S3_coassembly_k141_1818500

Search features with annotation key words

Displaying items 181-210 of 312 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1818500_179
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(150800..152110)
-----------------
DNA (1311bp)
protein (437aa)
ABC transporter sugar-binding protein {ECO:0000313|EMBL:KKQ81889.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
family 1 extracellular solute-binding protein
S_p1_S3_coassembly_k141_1818500_180
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

152153..153931
-----------------
DNA (1779bp)
protein (593aa)
VanW family protein (Fragment) Tax=uncultured bacterium RepID=K2CW54_9BACT
VanW family protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_1818500_181
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

154054..154293
-----------------
DNA (240bp)
protein (80aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
S_p1_S3_coassembly_k141_1818500_182
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

154290..154709
-----------------
DNA (420bp)
protein (140aa)
Putative uncharacterized protein Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU56_9AQUI bin=ACD24 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=ACD24 organism_group=WWE3 organism_desc=WWE3
PilT protein domain protein {ECO:0000313|EMBL:KKQ41996.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_37_8.;"
nucleic acid-binding protein
S_p1_S3_coassembly_k141_1818500_183
GWA2_OP11_37_6_partial, Microgenomates, Bacteria

Not on your lists

comp(154779..159584)
-----------------
DNA (4806bp)
protein (1602aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ35407.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_37_6.;"
hypothetical protein bin=GWC1_OP11_49_16_COMPLETE species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
S_p1_S3_coassembly_k141_1818500_184
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

159765..160946
-----------------
DNA (1182bp)
protein (394aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1WYS9_9BACT
ATPase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_1818500_185
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

160918..161883
-----------------
DNA (966bp)
protein (322aa)
adoK; adenosine kinase (EC:2.7.1.20); K00856 adenosine kinase [EC:2.7.1.20] bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
PfkB domain protein {ECO:0000313|EMBL:KKR15935.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ribokinase-like domain-containing protein
S_p1_S3_coassembly_k141_1818500_186
unknown

Not on your lists

161880..162002
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1818500_187
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(162049..163602)
-----------------
DNA (1554bp)
protein (518aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YQL8_9BACT
AAA-4 family protein {ECO:0000313|EMBL:KKR38282.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
hypothetical protein
S_p1_S3_coassembly_k141_1818500_188
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

163625..164881
-----------------
DNA (1257bp)
protein (419aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHE1_THEYD
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_1818500_189
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

164980..166578
-----------------
DNA (1599bp)
protein (533aa)
transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ35469.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
transcriptional regulator
S_p1_S3_coassembly_k141_1818500_190
RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(166720..166998)
-----------------
DNA (279bp)
protein (93aa)
RelE/StbE family addiction module toxin bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated
S_p1_S3_coassembly_k141_1818500_191
RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(166995..167282)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2E5R8_9BACT
Tax=RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated
S_p1_S3_coassembly_k141_1818500_192
unknown

Not on your lists

comp(167327..167704)
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1818500_193
unknown

Not on your lists

167957..168457
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1818500_194
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

168524..169084
-----------------
DNA (561bp)
protein (187aa)
2'-5' RNA ligase Tax=uncultured bacterium RepID=K2CH90_9BACT
2'-5' RNA ligase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_195
unknown

Not on your lists

comp(169077..169736)
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1818500_196
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(169724..170596)
-----------------
DNA (873bp)
protein (291aa)
seg 225..237 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_197
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

170708..170947
-----------------
DNA (240bp)
protein (80aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DFK7_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_1818500_198
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

170923..171336
-----------------
DNA (414bp)
protein (138aa)
doc; doc (death on cure) protein of bacteriophage P1; K07341 death on curing protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
death-on-curing family protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_1818500_199
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


171333..172328
-----------------
DNA (996bp)
protein (332aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_200
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

172357..172677
-----------------
DNA (321bp)
protein (107aa)
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_201
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists


172698..174803
-----------------
DNA (2106bp)
protein (702aa)
tro:trd_1512 valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
valyl-tRNA synthetase
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_1818500_202
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(174835..175593)
-----------------
DNA (759bp)
protein (253aa)
50S ribosomal protein L25 {ECO:0000313|EMBL:KKR41556.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC2_40_12.;"
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
S_p1_S3_coassembly_k141_1818500_203
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(175641..176483)
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein Tax=Bacillus endophyticus RepID=UPI00030375E8
sugar transport protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_204
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(176483..179410)
-----------------
DNA (2928bp)
protein (976aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DDV6_9BACT
GDP-mannose 4,6 dehydratase ISS
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1818500_205
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(179450..179857)
-----------------
DNA (408bp)
protein (136aa)
ribonuclease H bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
ribonuclease HI
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_1818500_206

Not on your lists

comp(179854..181068)
-----------------
DNA (1215bp)
protein (405aa)
putative oligosaccharide transporter bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD84583.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Membrane protein involved in the export of O-antigen and teichoic acid
S_p1_S3_coassembly_k141_1818500_207
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(181084..182316)
-----------------
DNA (1233bp)
protein (411aa)
transmembrane_regions 181..203 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
O-antigen ligase-related protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1818500_208
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(182285..182773)
-----------------
DNA (489bp)
protein (163aa)
jag; jag protein; K06346 spoIIIJ-associated protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
single-stranded nucleic acid binding R3H domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
Displaying items 181-210 of 312 in total

View Taxonomy